Gene : Pavir.3KG229900 P. virgatum v4.1
Defline:  (1 of 4) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80) Genomic Order:  3050
Name:  ? Pavir.3KG229900 Secondary Identifier:  ? PAC:37592431
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6908 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG229900 0.5kb upstream 0.5kb upstream 3584 true Chr03K: 30572851-30576434 Panicum virgatum
Pavir.3KG229900 0.5kb upstream 0.5kb upstream 500 false Chr03K: 30575935-30576434 Panicum virgatum
Pavir.3KG229900 0.5kb downstream 0.5kb downstream 3584 true Chr03K: 30572351-30575934 Panicum virgatum
Pavir.3KG229900 0.5kb downstream 0.5kb downstream 500 false Chr03K: 30572351-30572850 Panicum virgatum
Pavir.3KG229900 1.0kb upstream 1.0kb upstream 4084 true Chr03K: 30572851-30576934 Panicum virgatum
Pavir.3KG229900 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 30575935-30576934 Panicum virgatum
Pavir.3KG229900 1.0kb downstream 1.0kb downstream 4084 true Chr03K: 30571851-30575934 Panicum virgatum
Pavir.3KG229900 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 30571851-30572850 Panicum virgatum
Pavir.3KG229900 2.0kb upstream 2.0kb upstream 5084 true Chr03K: 30572851-30577934 Panicum virgatum
Pavir.3KG229900 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 30575935-30577934 Panicum virgatum
Pavir.3KG229900 2.0kb downstream 2.0kb downstream 5084 true Chr03K: 30570851-30575934 Panicum virgatum
Pavir.3KG229900 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 30570851-30572850 Panicum virgatum
Pavir.3KG229900 5.0kb upstream 5.0kb upstream 8084 true Chr03K: 30572851-30580934 Panicum virgatum
Pavir.3KG229900 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 30575935-30580934 Panicum virgatum
Pavir.3KG229900 5.0kb downstream 5.0kb downstream 8084 true Chr03K: 30567851-30575934 Panicum virgatum
Pavir.3KG229900 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 30567851-30572850 Panicum virgatum
Pavir.3KG229900 10.0kb upstream 10.0kb upstream 13084 true Chr03K: 30572851-30585934 Panicum virgatum
Pavir.3KG229900 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 30575935-30585934 Panicum virgatum
Pavir.3KG229900 10.0kb downstream 10.0kb downstream 13084 true Chr03K: 30562851-30575934 Panicum virgatum
Pavir.3KG229900 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 30562851-30572850 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177462 5267 Panicoideae View MSA
124570032 5269 Grass View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain