Gene : Pavir.3KG212600 P. virgatum v4.1
Defline:  (1 of 3) PTHR31342:SF7 - PROTEIN CHUP1, CHLOROPLASTIC Genomic Order:  1973
Name:  ? Pavir.3KG212600 Secondary Identifier:  ? PAC:37590699
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG212600 0.5kb upstream 0.5kb upstream 7323 true Chr03K: 18929244-18936566 Panicum virgatum
Pavir.3KG212600 0.5kb upstream 0.5kb upstream 500 false Chr03K: 18929244-18929743 Panicum virgatum
Pavir.3KG212600 0.5kb downstream 0.5kb downstream 7323 true Chr03K: 18929744-18937066 Panicum virgatum
Pavir.3KG212600 0.5kb downstream 0.5kb downstream 500 false Chr03K: 18936567-18937066 Panicum virgatum
Pavir.3KG212600 1.0kb upstream 1.0kb upstream 7823 true Chr03K: 18928744-18936566 Panicum virgatum
Pavir.3KG212600 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 18928744-18929743 Panicum virgatum
Pavir.3KG212600 1.0kb downstream 1.0kb downstream 7823 true Chr03K: 18929744-18937566 Panicum virgatum
Pavir.3KG212600 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 18936567-18937566 Panicum virgatum
Pavir.3KG212600 2.0kb upstream 2.0kb upstream 8823 true Chr03K: 18927744-18936566 Panicum virgatum
Pavir.3KG212600 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 18927744-18929743 Panicum virgatum
Pavir.3KG212600 2.0kb downstream 2.0kb downstream 8823 true Chr03K: 18929744-18938566 Panicum virgatum
Pavir.3KG212600 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 18936567-18938566 Panicum virgatum
Pavir.3KG212600 5.0kb upstream 5.0kb upstream 11823 true Chr03K: 18924744-18936566 Panicum virgatum
Pavir.3KG212600 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 18924744-18929743 Panicum virgatum
Pavir.3KG212600 5.0kb downstream 5.0kb downstream 11823 true Chr03K: 18929744-18941566 Panicum virgatum
Pavir.3KG212600 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 18936567-18941566 Panicum virgatum
Pavir.3KG212600 10.0kb upstream 10.0kb upstream 16823 true Chr03K: 18919744-18936566 Panicum virgatum
Pavir.3KG212600 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 18919744-18929743 Panicum virgatum
Pavir.3KG212600 10.0kb downstream 10.0kb downstream 16823 true Chr03K: 18929744-18946566 Panicum virgatum
Pavir.3KG212600 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 18936567-18946566 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122083167 5267 Panicoideae Singleton cluster - no MSA
124381364 5269 Grass Singleton cluster - no MSA
122047771 5273 Angiosperm View MSA
121348939 5274 Embryophyte View MSA
123381088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain