Gene : Thecc1EG024222 T. cacao v1.1
Defline:  (1 of 1) PTHR10351//PTHR10351:SF50 - TRANSCRIPTION FACTOR BTF3 // SUBFAMILY NOT NAMED Genomic Order:  1344
Name:  ? Thecc1EG024222 Secondary Identifier:  ? PAC:27422962
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024222 0.5kb upstream 0.5kb upstream 3039 true scaffold_5: 23398147-23401185 Theobroma cacao
Thecc1EG024222 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 23400686-23401185 Theobroma cacao
Thecc1EG024222 0.5kb downstream 0.5kb downstream 3039 true scaffold_5: 23397647-23400685 Theobroma cacao
Thecc1EG024222 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 23397647-23398146 Theobroma cacao
Thecc1EG024222 1.0kb upstream 1.0kb upstream 3539 true scaffold_5: 23398147-23401685 Theobroma cacao
Thecc1EG024222 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 23400686-23401685 Theobroma cacao
Thecc1EG024222 1.0kb downstream 1.0kb downstream 3539 true scaffold_5: 23397147-23400685 Theobroma cacao
Thecc1EG024222 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 23397147-23398146 Theobroma cacao
Thecc1EG024222 2.0kb upstream 2.0kb upstream 4539 true scaffold_5: 23398147-23402685 Theobroma cacao
Thecc1EG024222 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 23400686-23402685 Theobroma cacao
Thecc1EG024222 2.0kb downstream 2.0kb downstream 4539 true scaffold_5: 23396147-23400685 Theobroma cacao
Thecc1EG024222 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 23396147-23398146 Theobroma cacao
Thecc1EG024222 5.0kb upstream 5.0kb upstream 7539 true scaffold_5: 23398147-23405685 Theobroma cacao
Thecc1EG024222 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 23400686-23405685 Theobroma cacao
Thecc1EG024222 5.0kb downstream 5.0kb downstream 7539 true scaffold_5: 23393147-23400685 Theobroma cacao
Thecc1EG024222 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 23393147-23398146 Theobroma cacao
Thecc1EG024222 10.0kb upstream 10.0kb upstream 12539 true scaffold_5: 23398147-23410685 Theobroma cacao
Thecc1EG024222 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 23400686-23410685 Theobroma cacao
Thecc1EG024222 10.0kb downstream 10.0kb downstream 12539 true scaffold_5: 23388147-23400685 Theobroma cacao
Thecc1EG024222 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 23388147-23398146 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836188 5264 Brassicales-Malvales View MSA
124343146 5266 SBM View MSA
124251473 5268 Malvidae View MSA
124060990 5270 Rosid View MSA
123752380 5271 Pentapetalae View MSA
122793181 5272 Eudicot View MSA
122044361 5273 Angiosperm View MSA
121348079 5274 Embryophyte View MSA
123423973 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain