Gene : Pavir.3KG307900 P. virgatum v4.1
Defline:  (1 of 2) 2.1.1.167 - 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase Genomic Order:  2177
Name:  ? Pavir.3KG307900 Secondary Identifier:  ? PAC:37590236
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG307900 0.5kb upstream 0.5kb upstream 5798 true Chr03K: 22481081-22486878 Panicum virgatum
Pavir.3KG307900 0.5kb upstream 0.5kb upstream 500 false Chr03K: 22486379-22486878 Panicum virgatum
Pavir.3KG307900 0.5kb downstream 0.5kb downstream 5798 true Chr03K: 22480581-22486378 Panicum virgatum
Pavir.3KG307900 0.5kb downstream 0.5kb downstream 500 false Chr03K: 22480581-22481080 Panicum virgatum
Pavir.3KG307900 1.0kb upstream 1.0kb upstream 6298 true Chr03K: 22481081-22487378 Panicum virgatum
Pavir.3KG307900 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 22486379-22487378 Panicum virgatum
Pavir.3KG307900 1.0kb downstream 1.0kb downstream 6298 true Chr03K: 22480081-22486378 Panicum virgatum
Pavir.3KG307900 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 22480081-22481080 Panicum virgatum
Pavir.3KG307900 2.0kb upstream 2.0kb upstream 7298 true Chr03K: 22481081-22488378 Panicum virgatum
Pavir.3KG307900 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 22486379-22488378 Panicum virgatum
Pavir.3KG307900 2.0kb downstream 2.0kb downstream 7298 true Chr03K: 22479081-22486378 Panicum virgatum
Pavir.3KG307900 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 22479081-22481080 Panicum virgatum
Pavir.3KG307900 5.0kb upstream 5.0kb upstream 10298 true Chr03K: 22481081-22491378 Panicum virgatum
Pavir.3KG307900 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 22486379-22491378 Panicum virgatum
Pavir.3KG307900 5.0kb downstream 5.0kb downstream 10298 true Chr03K: 22476081-22486378 Panicum virgatum
Pavir.3KG307900 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 22476081-22481080 Panicum virgatum
Pavir.3KG307900 10.0kb upstream 10.0kb upstream 15298 true Chr03K: 22481081-22496378 Panicum virgatum
Pavir.3KG307900 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 22486379-22496378 Panicum virgatum
Pavir.3KG307900 10.0kb downstream 10.0kb downstream 15298 true Chr03K: 22471081-22486378 Panicum virgatum
Pavir.3KG307900 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 22471081-22481080 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122083062 5267 Panicoideae Singleton cluster - no MSA
124381269 5269 Grass Singleton cluster - no MSA
122043455 5273 Angiosperm View MSA
121347110 5274 Embryophyte View MSA
123425494 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain