Gene : Thecc1EG024180 T. cacao v1.1

Defline:  (1 of 2) PTHR10641//PTHR10641:SF455 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Genomic Order:  1329
Name:  ? Thecc1EG024180 Secondary Identifier:  ? PAC:27421924

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024180 0.5kb upstream 0.5kb upstream 3401 true scaffold_5: 22926096-22929496 Theobroma cacao
Thecc1EG024180 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 22926096-22926595 Theobroma cacao
Thecc1EG024180 0.5kb downstream 0.5kb downstream 3401 true scaffold_5: 22926596-22929996 Theobroma cacao
Thecc1EG024180 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 22929497-22929996 Theobroma cacao
Thecc1EG024180 1.0kb upstream 1.0kb upstream 3901 true scaffold_5: 22925596-22929496 Theobroma cacao
Thecc1EG024180 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 22925596-22926595 Theobroma cacao
Thecc1EG024180 1.0kb downstream 1.0kb downstream 3901 true scaffold_5: 22926596-22930496 Theobroma cacao
Thecc1EG024180 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 22929497-22930496 Theobroma cacao
Thecc1EG024180 2.0kb upstream 2.0kb upstream 4901 true scaffold_5: 22924596-22929496 Theobroma cacao
Thecc1EG024180 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 22924596-22926595 Theobroma cacao
Thecc1EG024180 2.0kb downstream 2.0kb downstream 4901 true scaffold_5: 22926596-22931496 Theobroma cacao
Thecc1EG024180 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 22929497-22931496 Theobroma cacao
Thecc1EG024180 5.0kb upstream 5.0kb upstream 7901 true scaffold_5: 22921596-22929496 Theobroma cacao
Thecc1EG024180 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 22921596-22926595 Theobroma cacao
Thecc1EG024180 5.0kb downstream 5.0kb downstream 7901 true scaffold_5: 22926596-22934496 Theobroma cacao
Thecc1EG024180 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 22929497-22934496 Theobroma cacao
Thecc1EG024180 10.0kb upstream 10.0kb upstream 12901 true scaffold_5: 22916596-22929496 Theobroma cacao
Thecc1EG024180 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 22916596-22926595 Theobroma cacao
Thecc1EG024180 10.0kb downstream 10.0kb downstream 12901 true scaffold_5: 22926596-22939496 Theobroma cacao
Thecc1EG024180 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 22929497-22939496 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835031 5264 Brassicales-Malvales View MSA
124351070 5266 SBM View MSA
124243976 5268 Malvidae View MSA
124071860 5270 Rosid View MSA
123753736 5271 Pentapetalae View MSA
122796974 5272 Eudicot View MSA
122049924 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351179 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain