Gene : Thecc1EG024196 T. cacao v1.1
Defline:  (1 of 2) K01527 - nascent polypeptide-associated complex subunit beta (EGD1, BTF3) Genomic Order:  1336
Name:  ? Thecc1EG024196 Secondary Identifier:  ? PAC:27424250
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024196 0.5kb upstream 0.5kb upstream 3163 true scaffold_5: 23118757-23121919 Theobroma cacao
Thecc1EG024196 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 23118757-23119256 Theobroma cacao
Thecc1EG024196 0.5kb downstream 0.5kb downstream 3163 true scaffold_5: 23119257-23122419 Theobroma cacao
Thecc1EG024196 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 23121920-23122419 Theobroma cacao
Thecc1EG024196 1.0kb upstream 1.0kb upstream 3663 true scaffold_5: 23118257-23121919 Theobroma cacao
Thecc1EG024196 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 23118257-23119256 Theobroma cacao
Thecc1EG024196 1.0kb downstream 1.0kb downstream 3663 true scaffold_5: 23119257-23122919 Theobroma cacao
Thecc1EG024196 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 23121920-23122919 Theobroma cacao
Thecc1EG024196 2.0kb upstream 2.0kb upstream 4663 true scaffold_5: 23117257-23121919 Theobroma cacao
Thecc1EG024196 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 23117257-23119256 Theobroma cacao
Thecc1EG024196 2.0kb downstream 2.0kb downstream 4663 true scaffold_5: 23119257-23123919 Theobroma cacao
Thecc1EG024196 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 23121920-23123919 Theobroma cacao
Thecc1EG024196 5.0kb upstream 5.0kb upstream 7663 true scaffold_5: 23114257-23121919 Theobroma cacao
Thecc1EG024196 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 23114257-23119256 Theobroma cacao
Thecc1EG024196 5.0kb downstream 5.0kb downstream 7663 true scaffold_5: 23119257-23126919 Theobroma cacao
Thecc1EG024196 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 23121920-23126919 Theobroma cacao
Thecc1EG024196 10.0kb upstream 10.0kb upstream 12663 true scaffold_5: 23109257-23121919 Theobroma cacao
Thecc1EG024196 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 23109257-23119256 Theobroma cacao
Thecc1EG024196 10.0kb downstream 10.0kb downstream 12663 true scaffold_5: 23119257-23131919 Theobroma cacao
Thecc1EG024196 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 23121920-23131919 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836188 5264 Brassicales-Malvales View MSA
124343146 5266 SBM View MSA
124251473 5268 Malvidae View MSA
124060990 5270 Rosid View MSA
123752380 5271 Pentapetalae View MSA
122793181 5272 Eudicot View MSA
122044361 5273 Angiosperm View MSA
121348079 5274 Embryophyte View MSA
123423973 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain