Gene : Thecc1EG024176 T. cacao v1.1
Defline:  (1 of 1) PTHR17224:SF4 - PEPTIDYL-TRNA HYDROLASE, MITOCHONDRIAL Genomic Order:  1327
Name:  ? Thecc1EG024176 Secondary Identifier:  ? PAC:27424844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024176 0.5kb upstream 0.5kb upstream 7994 true scaffold_5: 22884699-22892692 Theobroma cacao
Thecc1EG024176 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 22892193-22892692 Theobroma cacao
Thecc1EG024176 0.5kb downstream 0.5kb downstream 7994 true scaffold_5: 22884199-22892192 Theobroma cacao
Thecc1EG024176 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 22884199-22884698 Theobroma cacao
Thecc1EG024176 1.0kb upstream 1.0kb upstream 8494 true scaffold_5: 22884699-22893192 Theobroma cacao
Thecc1EG024176 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 22892193-22893192 Theobroma cacao
Thecc1EG024176 1.0kb downstream 1.0kb downstream 8494 true scaffold_5: 22883699-22892192 Theobroma cacao
Thecc1EG024176 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 22883699-22884698 Theobroma cacao
Thecc1EG024176 2.0kb upstream 2.0kb upstream 9494 true scaffold_5: 22884699-22894192 Theobroma cacao
Thecc1EG024176 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 22892193-22894192 Theobroma cacao
Thecc1EG024176 2.0kb downstream 2.0kb downstream 9494 true scaffold_5: 22882699-22892192 Theobroma cacao
Thecc1EG024176 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 22882699-22884698 Theobroma cacao
Thecc1EG024176 5.0kb upstream 5.0kb upstream 12494 true scaffold_5: 22884699-22897192 Theobroma cacao
Thecc1EG024176 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 22892193-22897192 Theobroma cacao
Thecc1EG024176 5.0kb downstream 5.0kb downstream 12494 true scaffold_5: 22879699-22892192 Theobroma cacao
Thecc1EG024176 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 22879699-22884698 Theobroma cacao
Thecc1EG024176 10.0kb upstream 10.0kb upstream 17494 true scaffold_5: 22884699-22902192 Theobroma cacao
Thecc1EG024176 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 22892193-22902192 Theobroma cacao
Thecc1EG024176 10.0kb downstream 10.0kb downstream 17494 true scaffold_5: 22874699-22892192 Theobroma cacao
Thecc1EG024176 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 22874699-22884698 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834617 5264 Brassicales-Malvales View MSA
124338140 5266 SBM View MSA
124238110 5268 Malvidae View MSA
124061244 5270 Rosid View MSA
123749131 5271 Pentapetalae View MSA
122786044 5272 Eudicot View MSA
122049044 5273 Angiosperm View MSA
121347021 5274 Embryophyte View MSA
123426354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain