Gene : Pavir.3KG341200 P. virgatum v4.1
Defline:  (1 of 3) PTHR12532:SF0 - TRANSCRIPTIONAL REGULATORY PROTEIN HAH1-RELATED Genomic Order:  2714
Name:  ? Pavir.3KG341200 Secondary Identifier:  ? PAC:37591467
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG341200 0.5kb upstream 0.5kb upstream 3997 true Chr03K: 27445878-27449874 Panicum virgatum
Pavir.3KG341200 0.5kb upstream 0.5kb upstream 500 false Chr03K: 27449375-27449874 Panicum virgatum
Pavir.3KG341200 0.5kb downstream 0.5kb downstream 3997 true Chr03K: 27445378-27449374 Panicum virgatum
Pavir.3KG341200 0.5kb downstream 0.5kb downstream 500 false Chr03K: 27445378-27445877 Panicum virgatum
Pavir.3KG341200 1.0kb upstream 1.0kb upstream 4497 true Chr03K: 27445878-27450374 Panicum virgatum
Pavir.3KG341200 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 27449375-27450374 Panicum virgatum
Pavir.3KG341200 1.0kb downstream 1.0kb downstream 4497 true Chr03K: 27444878-27449374 Panicum virgatum
Pavir.3KG341200 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 27444878-27445877 Panicum virgatum
Pavir.3KG341200 2.0kb upstream 2.0kb upstream 5497 true Chr03K: 27445878-27451374 Panicum virgatum
Pavir.3KG341200 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 27449375-27451374 Panicum virgatum
Pavir.3KG341200 2.0kb downstream 2.0kb downstream 5497 true Chr03K: 27443878-27449374 Panicum virgatum
Pavir.3KG341200 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 27443878-27445877 Panicum virgatum
Pavir.3KG341200 5.0kb upstream 5.0kb upstream 8497 true Chr03K: 27445878-27454374 Panicum virgatum
Pavir.3KG341200 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 27449375-27454374 Panicum virgatum
Pavir.3KG341200 5.0kb downstream 5.0kb downstream 8497 true Chr03K: 27440878-27449374 Panicum virgatum
Pavir.3KG341200 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 27440878-27445877 Panicum virgatum
Pavir.3KG341200 10.0kb upstream 10.0kb upstream 13497 true Chr03K: 27445878-27459374 Panicum virgatum
Pavir.3KG341200 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 27449375-27459374 Panicum virgatum
Pavir.3KG341200 10.0kb downstream 10.0kb downstream 13497 true Chr03K: 27435878-27449374 Panicum virgatum
Pavir.3KG341200 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 27435878-27445877 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187881 5267 Panicoideae View MSA
124579095 5269 Grass View MSA
122042716 5273 Angiosperm View MSA
121345418 5274 Embryophyte View MSA
123424346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain