Gene : Thecc1EG024709 T. cacao v1.1
Defline:  (1 of 15) PF04640 - PLATZ transcription factor (PLATZ) Genomic Order:  1595
Name:  ? Thecc1EG024709 Secondary Identifier:  ? PAC:27424339
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024709 0.5kb upstream 0.5kb upstream 1535 true scaffold_5: 28003224-28004758 Theobroma cacao
Thecc1EG024709 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 28003224-28003723 Theobroma cacao
Thecc1EG024709 0.5kb downstream 0.5kb downstream 1535 true scaffold_5: 28003724-28005258 Theobroma cacao
Thecc1EG024709 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 28004759-28005258 Theobroma cacao
Thecc1EG024709 1.0kb upstream 1.0kb upstream 2035 true scaffold_5: 28002724-28004758 Theobroma cacao
Thecc1EG024709 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 28002724-28003723 Theobroma cacao
Thecc1EG024709 1.0kb downstream 1.0kb downstream 2035 true scaffold_5: 28003724-28005758 Theobroma cacao
Thecc1EG024709 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 28004759-28005758 Theobroma cacao
Thecc1EG024709 2.0kb upstream 2.0kb upstream 3035 true scaffold_5: 28001724-28004758 Theobroma cacao
Thecc1EG024709 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 28001724-28003723 Theobroma cacao
Thecc1EG024709 2.0kb downstream 2.0kb downstream 3035 true scaffold_5: 28003724-28006758 Theobroma cacao
Thecc1EG024709 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 28004759-28006758 Theobroma cacao
Thecc1EG024709 5.0kb upstream 5.0kb upstream 6035 true scaffold_5: 27998724-28004758 Theobroma cacao
Thecc1EG024709 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 27998724-28003723 Theobroma cacao
Thecc1EG024709 5.0kb downstream 5.0kb downstream 6035 true scaffold_5: 28003724-28009758 Theobroma cacao
Thecc1EG024709 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 28004759-28009758 Theobroma cacao
Thecc1EG024709 10.0kb upstream 10.0kb upstream 11035 true scaffold_5: 27993724-28004758 Theobroma cacao
Thecc1EG024709 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 27993724-28003723 Theobroma cacao
Thecc1EG024709 10.0kb downstream 10.0kb downstream 11035 true scaffold_5: 28003724-28014758 Theobroma cacao
Thecc1EG024709 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 28004759-28014758 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836323 5264 Brassicales-Malvales View MSA
124347969 5266 SBM View MSA
124245112 5268 Malvidae View MSA
124074114 5270 Rosid View MSA
123750243 5271 Pentapetalae View MSA
122790111 5272 Eudicot View MSA
122049805 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain