Gene : Thecc1EG024713 T. cacao v1.1
Defline:  (1 of 1) PTHR13301//PTHR13301:SF64 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1599
Name:  ? Thecc1EG024713 Secondary Identifier:  ? PAC:27423816
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1001 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024713 0.5kb upstream 0.5kb upstream 9032 true scaffold_5: 28028158-28037189 Theobroma cacao
Thecc1EG024713 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 28036690-28037189 Theobroma cacao
Thecc1EG024713 0.5kb downstream 0.5kb downstream 9032 true scaffold_5: 28027658-28036689 Theobroma cacao
Thecc1EG024713 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 28027658-28028157 Theobroma cacao
Thecc1EG024713 1.0kb upstream 1.0kb upstream 9532 true scaffold_5: 28028158-28037689 Theobroma cacao
Thecc1EG024713 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 28036690-28037689 Theobroma cacao
Thecc1EG024713 1.0kb downstream 1.0kb downstream 9532 true scaffold_5: 28027158-28036689 Theobroma cacao
Thecc1EG024713 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 28027158-28028157 Theobroma cacao
Thecc1EG024713 2.0kb upstream 2.0kb upstream 10532 true scaffold_5: 28028158-28038689 Theobroma cacao
Thecc1EG024713 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 28036690-28038689 Theobroma cacao
Thecc1EG024713 2.0kb downstream 2.0kb downstream 10532 true scaffold_5: 28026158-28036689 Theobroma cacao
Thecc1EG024713 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 28026158-28028157 Theobroma cacao
Thecc1EG024713 5.0kb upstream 5.0kb upstream 13532 true scaffold_5: 28028158-28041689 Theobroma cacao
Thecc1EG024713 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 28036690-28041689 Theobroma cacao
Thecc1EG024713 5.0kb downstream 5.0kb downstream 13532 true scaffold_5: 28023158-28036689 Theobroma cacao
Thecc1EG024713 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 28023158-28028157 Theobroma cacao
Thecc1EG024713 10.0kb upstream 10.0kb upstream 18532 true scaffold_5: 28028158-28046689 Theobroma cacao
Thecc1EG024713 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 28036690-28046689 Theobroma cacao
Thecc1EG024713 10.0kb downstream 10.0kb downstream 18532 true scaffold_5: 28018158-28036689 Theobroma cacao
Thecc1EG024713 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 28018158-28028157 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825763 5264 Brassicales-Malvales View MSA
124320746 5266 SBM View MSA
124248196 5268 Malvidae View MSA
124073746 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain