Gene : Thecc1EG024686 T. cacao v1.1
Defline:  (1 of 4) K00559 - sterol 24-C-methyltransferase (E2.1.1.41, SMT1, ERG6) Genomic Order:  1582
Name:  ? Thecc1EG024686 Secondary Identifier:  ? PAC:27424058
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-2541 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024686 0.5kb upstream 0.5kb upstream 7814 true scaffold_5: 27813550-27821363 Theobroma cacao
Thecc1EG024686 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 27820864-27821363 Theobroma cacao
Thecc1EG024686 0.5kb downstream 0.5kb downstream 7814 true scaffold_5: 27813050-27820863 Theobroma cacao
Thecc1EG024686 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 27813050-27813549 Theobroma cacao
Thecc1EG024686 1.0kb upstream 1.0kb upstream 8314 true scaffold_5: 27813550-27821863 Theobroma cacao
Thecc1EG024686 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 27820864-27821863 Theobroma cacao
Thecc1EG024686 1.0kb downstream 1.0kb downstream 8314 true scaffold_5: 27812550-27820863 Theobroma cacao
Thecc1EG024686 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 27812550-27813549 Theobroma cacao
Thecc1EG024686 2.0kb upstream 2.0kb upstream 9314 true scaffold_5: 27813550-27822863 Theobroma cacao
Thecc1EG024686 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 27820864-27822863 Theobroma cacao
Thecc1EG024686 2.0kb downstream 2.0kb downstream 9314 true scaffold_5: 27811550-27820863 Theobroma cacao
Thecc1EG024686 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 27811550-27813549 Theobroma cacao
Thecc1EG024686 5.0kb upstream 5.0kb upstream 12314 true scaffold_5: 27813550-27825863 Theobroma cacao
Thecc1EG024686 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 27820864-27825863 Theobroma cacao
Thecc1EG024686 5.0kb downstream 5.0kb downstream 12314 true scaffold_5: 27808550-27820863 Theobroma cacao
Thecc1EG024686 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 27808550-27813549 Theobroma cacao
Thecc1EG024686 10.0kb upstream 10.0kb upstream 17314 true scaffold_5: 27813550-27830863 Theobroma cacao
Thecc1EG024686 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 27820864-27830863 Theobroma cacao
Thecc1EG024686 10.0kb downstream 10.0kb downstream 17314 true scaffold_5: 27803550-27820863 Theobroma cacao
Thecc1EG024686 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 27803550-27813549 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
123842261 5264 Brassicales-Malvales View MSA
124350111 5266 SBM View MSA
124248608 5268 Malvidae View MSA
124073694 5270 Rosid View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain