Gene : Pavir.3KG416000 P. virgatum v4.1
Defline:  (1 of 2) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase Genomic Order:  3907
Name:  ? Pavir.3KG416000 Secondary Identifier:  ? PAC:37589671
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PYRIDNUCSYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG416000 0.5kb upstream 0.5kb upstream 6819 true Chr03K: 52032754-52039572 Panicum virgatum
Pavir.3KG416000 0.5kb upstream 0.5kb upstream 500 false Chr03K: 52032754-52033253 Panicum virgatum
Pavir.3KG416000 0.5kb downstream 0.5kb downstream 6819 true Chr03K: 52033254-52040072 Panicum virgatum
Pavir.3KG416000 0.5kb downstream 0.5kb downstream 500 false Chr03K: 52039573-52040072 Panicum virgatum
Pavir.3KG416000 1.0kb upstream 1.0kb upstream 7319 true Chr03K: 52032254-52039572 Panicum virgatum
Pavir.3KG416000 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 52032254-52033253 Panicum virgatum
Pavir.3KG416000 1.0kb downstream 1.0kb downstream 7319 true Chr03K: 52033254-52040572 Panicum virgatum
Pavir.3KG416000 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 52039573-52040572 Panicum virgatum
Pavir.3KG416000 2.0kb upstream 2.0kb upstream 8319 true Chr03K: 52031254-52039572 Panicum virgatum
Pavir.3KG416000 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 52031254-52033253 Panicum virgatum
Pavir.3KG416000 2.0kb downstream 2.0kb downstream 8319 true Chr03K: 52033254-52041572 Panicum virgatum
Pavir.3KG416000 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 52039573-52041572 Panicum virgatum
Pavir.3KG416000 5.0kb upstream 5.0kb upstream 11319 true Chr03K: 52028254-52039572 Panicum virgatum
Pavir.3KG416000 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 52028254-52033253 Panicum virgatum
Pavir.3KG416000 5.0kb downstream 5.0kb downstream 11319 true Chr03K: 52033254-52044572 Panicum virgatum
Pavir.3KG416000 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 52039573-52044572 Panicum virgatum
Pavir.3KG416000 10.0kb upstream 10.0kb upstream 16319 true Chr03K: 52023254-52039572 Panicum virgatum
Pavir.3KG416000 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 52023254-52033253 Panicum virgatum
Pavir.3KG416000 10.0kb downstream 10.0kb downstream 16319 true Chr03K: 52033254-52049572 Panicum virgatum
Pavir.3KG416000 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 52039573-52049572 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122082934 5267 Panicoideae Singleton cluster - no MSA
124584011 5269 Grass View MSA
122044938 5273 Angiosperm View MSA
121346502 5274 Embryophyte View MSA
123424432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain