Gene : Pavir.3KG393900 P. virgatum v4.1
Defline:  (1 of 2) K11858 - ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12] (USP48) Genomic Order:  4099
Name:  ? Pavir.3KG393900 Secondary Identifier:  ? PAC:37595415
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG393900 0.5kb upstream 0.5kb upstream 15334 true Chr03K: 55947802-55963135 Panicum virgatum
Pavir.3KG393900 0.5kb upstream 0.5kb upstream 500 false Chr03K: 55947802-55948301 Panicum virgatum
Pavir.3KG393900 0.5kb downstream 0.5kb downstream 15334 true Chr03K: 55948302-55963635 Panicum virgatum
Pavir.3KG393900 0.5kb downstream 0.5kb downstream 500 false Chr03K: 55963136-55963635 Panicum virgatum
Pavir.3KG393900 1.0kb upstream 1.0kb upstream 15834 true Chr03K: 55947302-55963135 Panicum virgatum
Pavir.3KG393900 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 55947302-55948301 Panicum virgatum
Pavir.3KG393900 1.0kb downstream 1.0kb downstream 15834 true Chr03K: 55948302-55964135 Panicum virgatum
Pavir.3KG393900 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 55963136-55964135 Panicum virgatum
Pavir.3KG393900 2.0kb upstream 2.0kb upstream 16834 true Chr03K: 55946302-55963135 Panicum virgatum
Pavir.3KG393900 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 55946302-55948301 Panicum virgatum
Pavir.3KG393900 2.0kb downstream 2.0kb downstream 16834 true Chr03K: 55948302-55965135 Panicum virgatum
Pavir.3KG393900 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 55963136-55965135 Panicum virgatum
Pavir.3KG393900 5.0kb upstream 5.0kb upstream 19834 true Chr03K: 55943302-55963135 Panicum virgatum
Pavir.3KG393900 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 55943302-55948301 Panicum virgatum
Pavir.3KG393900 5.0kb downstream 5.0kb downstream 19834 true Chr03K: 55948302-55968135 Panicum virgatum
Pavir.3KG393900 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 55963136-55968135 Panicum virgatum
Pavir.3KG393900 10.0kb upstream 10.0kb upstream 24834 true Chr03K: 55938302-55963135 Panicum virgatum
Pavir.3KG393900 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 55938302-55948301 Panicum virgatum
Pavir.3KG393900 10.0kb downstream 10.0kb downstream 24834 true Chr03K: 55948302-55973135 Panicum virgatum
Pavir.3KG393900 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 55963136-55973135 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199963 5267 Panicoideae View MSA
124581112 5269 Grass View MSA
122043849 5273 Angiosperm View MSA
121347383 5274 Embryophyte View MSA
123427406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain