Gene : Thecc1EG024634 T. cacao v1.1
Defline:  (1 of 1) PTHR13035:SF0 - PROTEIN N-TERMINAL GLUTAMINE AMIDOHYDROLASE Genomic Order:  1550
Name:  ? Thecc1EG024634 Secondary Identifier:  ? PAC:27422600
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024634 0.5kb upstream 0.5kb upstream 3973 true scaffold_5: 27350606-27354578 Theobroma cacao
Thecc1EG024634 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 27350606-27351105 Theobroma cacao
Thecc1EG024634 0.5kb downstream 0.5kb downstream 3973 true scaffold_5: 27351106-27355078 Theobroma cacao
Thecc1EG024634 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 27354579-27355078 Theobroma cacao
Thecc1EG024634 1.0kb upstream 1.0kb upstream 4473 true scaffold_5: 27350106-27354578 Theobroma cacao
Thecc1EG024634 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 27350106-27351105 Theobroma cacao
Thecc1EG024634 1.0kb downstream 1.0kb downstream 4473 true scaffold_5: 27351106-27355578 Theobroma cacao
Thecc1EG024634 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 27354579-27355578 Theobroma cacao
Thecc1EG024634 2.0kb upstream 2.0kb upstream 5473 true scaffold_5: 27349106-27354578 Theobroma cacao
Thecc1EG024634 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 27349106-27351105 Theobroma cacao
Thecc1EG024634 2.0kb downstream 2.0kb downstream 5473 true scaffold_5: 27351106-27356578 Theobroma cacao
Thecc1EG024634 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 27354579-27356578 Theobroma cacao
Thecc1EG024634 5.0kb upstream 5.0kb upstream 8473 true scaffold_5: 27346106-27354578 Theobroma cacao
Thecc1EG024634 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 27346106-27351105 Theobroma cacao
Thecc1EG024634 5.0kb downstream 5.0kb downstream 8473 true scaffold_5: 27351106-27359578 Theobroma cacao
Thecc1EG024634 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 27354579-27359578 Theobroma cacao
Thecc1EG024634 10.0kb upstream 10.0kb upstream 13473 true scaffold_5: 27341106-27354578 Theobroma cacao
Thecc1EG024634 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 27341106-27351105 Theobroma cacao
Thecc1EG024634 10.0kb downstream 10.0kb downstream 13473 true scaffold_5: 27351106-27364578 Theobroma cacao
Thecc1EG024634 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 27354579-27364578 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827532 5264 Brassicales-Malvales View MSA
124346535 5266 SBM View MSA
124239318 5268 Malvidae View MSA
124065131 5270 Rosid View MSA
123740111 5271 Pentapetalae View MSA
122785886 5272 Eudicot View MSA
122047116 5273 Angiosperm View MSA
121346421 5274 Embryophyte View MSA
123380380 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain