Gene : Thecc1EG024639 T. cacao v1.1
Defline:  (1 of 1) PTHR31362:SF1 - EXPRESSED PROTEIN Genomic Order:  1555
Name:  ? Thecc1EG024639 Secondary Identifier:  ? PAC:27424315
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024639 0.5kb upstream 0.5kb upstream 5893 true scaffold_5: 27374479-27380371 Theobroma cacao
Thecc1EG024639 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 27379872-27380371 Theobroma cacao
Thecc1EG024639 0.5kb downstream 0.5kb downstream 5893 true scaffold_5: 27373979-27379871 Theobroma cacao
Thecc1EG024639 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 27373979-27374478 Theobroma cacao
Thecc1EG024639 1.0kb upstream 1.0kb upstream 6393 true scaffold_5: 27374479-27380871 Theobroma cacao
Thecc1EG024639 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 27379872-27380871 Theobroma cacao
Thecc1EG024639 1.0kb downstream 1.0kb downstream 6393 true scaffold_5: 27373479-27379871 Theobroma cacao
Thecc1EG024639 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 27373479-27374478 Theobroma cacao
Thecc1EG024639 2.0kb upstream 2.0kb upstream 7393 true scaffold_5: 27374479-27381871 Theobroma cacao
Thecc1EG024639 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 27379872-27381871 Theobroma cacao
Thecc1EG024639 2.0kb downstream 2.0kb downstream 7393 true scaffold_5: 27372479-27379871 Theobroma cacao
Thecc1EG024639 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 27372479-27374478 Theobroma cacao
Thecc1EG024639 5.0kb upstream 5.0kb upstream 10393 true scaffold_5: 27374479-27384871 Theobroma cacao
Thecc1EG024639 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 27379872-27384871 Theobroma cacao
Thecc1EG024639 5.0kb downstream 5.0kb downstream 10393 true scaffold_5: 27369479-27379871 Theobroma cacao
Thecc1EG024639 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 27369479-27374478 Theobroma cacao
Thecc1EG024639 10.0kb upstream 10.0kb upstream 15393 true scaffold_5: 27374479-27389871 Theobroma cacao
Thecc1EG024639 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 27379872-27389871 Theobroma cacao
Thecc1EG024639 10.0kb downstream 10.0kb downstream 15393 true scaffold_5: 27364479-27379871 Theobroma cacao
Thecc1EG024639 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 27364479-27374478 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836210 5264 Brassicales-Malvales View MSA
124337642 5266 SBM View MSA
124245745 5268 Malvidae View MSA
124061899 5270 Rosid View MSA
123745860 5271 Pentapetalae View MSA
122790423 5272 Eudicot View MSA
122044910 5273 Angiosperm View MSA
121350104 5274 Embryophyte View MSA
123426431 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain