Gene : Thecc1EG024598 T. cacao v1.1
Defline:  (1 of 1) K15326 - tRNA-splicing endonuclease subunit Sen54 (TSEN54) Genomic Order:  1529
Name:  ? Thecc1EG024598 Secondary Identifier:  ? PAC:27421981
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024598 0.5kb upstream 0.5kb upstream 5096 true scaffold_5: 27067308-27072403 Theobroma cacao
Thecc1EG024598 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 27071904-27072403 Theobroma cacao
Thecc1EG024598 0.5kb downstream 0.5kb downstream 5096 true scaffold_5: 27066808-27071903 Theobroma cacao
Thecc1EG024598 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 27066808-27067307 Theobroma cacao
Thecc1EG024598 1.0kb upstream 1.0kb upstream 5596 true scaffold_5: 27067308-27072903 Theobroma cacao
Thecc1EG024598 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 27071904-27072903 Theobroma cacao
Thecc1EG024598 1.0kb downstream 1.0kb downstream 5596 true scaffold_5: 27066308-27071903 Theobroma cacao
Thecc1EG024598 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 27066308-27067307 Theobroma cacao
Thecc1EG024598 2.0kb upstream 2.0kb upstream 6596 true scaffold_5: 27067308-27073903 Theobroma cacao
Thecc1EG024598 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 27071904-27073903 Theobroma cacao
Thecc1EG024598 2.0kb downstream 2.0kb downstream 6596 true scaffold_5: 27065308-27071903 Theobroma cacao
Thecc1EG024598 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 27065308-27067307 Theobroma cacao
Thecc1EG024598 5.0kb upstream 5.0kb upstream 9596 true scaffold_5: 27067308-27076903 Theobroma cacao
Thecc1EG024598 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 27071904-27076903 Theobroma cacao
Thecc1EG024598 5.0kb downstream 5.0kb downstream 9596 true scaffold_5: 27062308-27071903 Theobroma cacao
Thecc1EG024598 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 27062308-27067307 Theobroma cacao
Thecc1EG024598 10.0kb upstream 10.0kb upstream 14596 true scaffold_5: 27067308-27081903 Theobroma cacao
Thecc1EG024598 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 27071904-27081903 Theobroma cacao
Thecc1EG024598 10.0kb downstream 10.0kb downstream 14596 true scaffold_5: 27057308-27071903 Theobroma cacao
Thecc1EG024598 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 27057308-27067307 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839324 5264 Brassicales-Malvales View MSA
124351445 5266 SBM View MSA
124243740 5268 Malvidae View MSA
124066915 5270 Rosid View MSA
123737661 5271 Pentapetalae View MSA
122790630 5272 Eudicot View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain