Gene : Thecc1EG024579 T. cacao v1.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF175 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL18 Genomic Order:  1519
Name:  ? Thecc1EG024579 Secondary Identifier:  ? PAC:27424961
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024579 0.5kb upstream 0.5kb upstream 4629 true scaffold_5: 26932128-26936756 Theobroma cacao
Thecc1EG024579 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 26936257-26936756 Theobroma cacao
Thecc1EG024579 0.5kb downstream 0.5kb downstream 4629 true scaffold_5: 26931628-26936256 Theobroma cacao
Thecc1EG024579 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 26931628-26932127 Theobroma cacao
Thecc1EG024579 1.0kb upstream 1.0kb upstream 5129 true scaffold_5: 26932128-26937256 Theobroma cacao
Thecc1EG024579 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 26936257-26937256 Theobroma cacao
Thecc1EG024579 1.0kb downstream 1.0kb downstream 5129 true scaffold_5: 26931128-26936256 Theobroma cacao
Thecc1EG024579 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 26931128-26932127 Theobroma cacao
Thecc1EG024579 2.0kb upstream 2.0kb upstream 6129 true scaffold_5: 26932128-26938256 Theobroma cacao
Thecc1EG024579 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 26936257-26938256 Theobroma cacao
Thecc1EG024579 2.0kb downstream 2.0kb downstream 6129 true scaffold_5: 26930128-26936256 Theobroma cacao
Thecc1EG024579 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 26930128-26932127 Theobroma cacao
Thecc1EG024579 5.0kb upstream 5.0kb upstream 9129 true scaffold_5: 26932128-26941256 Theobroma cacao
Thecc1EG024579 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 26936257-26941256 Theobroma cacao
Thecc1EG024579 5.0kb downstream 5.0kb downstream 9129 true scaffold_5: 26927128-26936256 Theobroma cacao
Thecc1EG024579 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 26927128-26932127 Theobroma cacao
Thecc1EG024579 10.0kb upstream 10.0kb upstream 14129 true scaffold_5: 26932128-26946256 Theobroma cacao
Thecc1EG024579 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 26936257-26946256 Theobroma cacao
Thecc1EG024579 10.0kb downstream 10.0kb downstream 14129 true scaffold_5: 26922128-26936256 Theobroma cacao
Thecc1EG024579 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 26922128-26932127 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829772 5264 Brassicales-Malvales View MSA
124342991 5266 SBM View MSA
124253386 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain