Gene : Pavir.3KG563000 P. virgatum v4.1
Defline:  (1 of 5) PF01936//PF12872 - NYN domain (NYN) // OST-HTH/LOTUS domain (OST-HTH) Genomic Order:  5141
Name:  ? Pavir.3KG563000 Secondary Identifier:  ? PAC:37595391
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG563000 0.5kb upstream 0.5kb upstream 6946 true Chr03K: 71339372-71346317 Panicum virgatum
Pavir.3KG563000 0.5kb upstream 0.5kb upstream 500 false Chr03K: 71339372-71339871 Panicum virgatum
Pavir.3KG563000 0.5kb downstream 0.5kb downstream 6946 true Chr03K: 71339872-71346817 Panicum virgatum
Pavir.3KG563000 0.5kb downstream 0.5kb downstream 500 false Chr03K: 71346318-71346817 Panicum virgatum
Pavir.3KG563000 1.0kb upstream 1.0kb upstream 7446 true Chr03K: 71338872-71346317 Panicum virgatum
Pavir.3KG563000 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 71338872-71339871 Panicum virgatum
Pavir.3KG563000 1.0kb downstream 1.0kb downstream 7446 true Chr03K: 71339872-71347317 Panicum virgatum
Pavir.3KG563000 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 71346318-71347317 Panicum virgatum
Pavir.3KG563000 2.0kb upstream 2.0kb upstream 8446 true Chr03K: 71337872-71346317 Panicum virgatum
Pavir.3KG563000 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 71337872-71339871 Panicum virgatum
Pavir.3KG563000 2.0kb downstream 2.0kb downstream 8446 true Chr03K: 71339872-71348317 Panicum virgatum
Pavir.3KG563000 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 71346318-71348317 Panicum virgatum
Pavir.3KG563000 5.0kb upstream 5.0kb upstream 11446 true Chr03K: 71334872-71346317 Panicum virgatum
Pavir.3KG563000 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 71334872-71339871 Panicum virgatum
Pavir.3KG563000 5.0kb downstream 5.0kb downstream 11446 true Chr03K: 71339872-71351317 Panicum virgatum
Pavir.3KG563000 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 71346318-71351317 Panicum virgatum
Pavir.3KG563000 10.0kb upstream 10.0kb upstream 16446 true Chr03K: 71329872-71346317 Panicum virgatum
Pavir.3KG563000 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 71329872-71339871 Panicum virgatum
Pavir.3KG563000 10.0kb downstream 10.0kb downstream 16446 true Chr03K: 71339872-71356317 Panicum virgatum
Pavir.3KG563000 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 71346318-71356317 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122084312 5267 Panicoideae Singleton cluster - no MSA
124581421 5269 Grass View MSA
122044167 5273 Angiosperm View MSA
121346389 5274 Embryophyte View MSA
123380376 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain