Gene : Pavir.3KG544300 P. virgatum v4.1
Defline:  (1 of 26) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  4968
Name:  ? Pavir.3KG544300 Secondary Identifier:  ? PAC:37589764
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG544300 0.5kb upstream 0.5kb upstream 6851 true Chr03K: 69536413-69543263 Panicum virgatum
Pavir.3KG544300 0.5kb upstream 0.5kb upstream 500 false Chr03K: 69542764-69543263 Panicum virgatum
Pavir.3KG544300 0.5kb downstream 0.5kb downstream 6851 true Chr03K: 69535913-69542763 Panicum virgatum
Pavir.3KG544300 0.5kb downstream 0.5kb downstream 500 false Chr03K: 69535913-69536412 Panicum virgatum
Pavir.3KG544300 1.0kb upstream 1.0kb upstream 7351 true Chr03K: 69536413-69543763 Panicum virgatum
Pavir.3KG544300 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 69542764-69543763 Panicum virgatum
Pavir.3KG544300 1.0kb downstream 1.0kb downstream 7351 true Chr03K: 69535413-69542763 Panicum virgatum
Pavir.3KG544300 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 69535413-69536412 Panicum virgatum
Pavir.3KG544300 2.0kb upstream 2.0kb upstream 8351 true Chr03K: 69536413-69544763 Panicum virgatum
Pavir.3KG544300 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 69542764-69544763 Panicum virgatum
Pavir.3KG544300 2.0kb downstream 2.0kb downstream 8351 true Chr03K: 69534413-69542763 Panicum virgatum
Pavir.3KG544300 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 69534413-69536412 Panicum virgatum
Pavir.3KG544300 5.0kb upstream 5.0kb upstream 11351 true Chr03K: 69536413-69547763 Panicum virgatum
Pavir.3KG544300 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 69542764-69547763 Panicum virgatum
Pavir.3KG544300 5.0kb downstream 5.0kb downstream 11351 true Chr03K: 69531413-69542763 Panicum virgatum
Pavir.3KG544300 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 69531413-69536412 Panicum virgatum
Pavir.3KG544300 10.0kb upstream 10.0kb upstream 16351 true Chr03K: 69536413-69552763 Panicum virgatum
Pavir.3KG544300 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 69542764-69552763 Panicum virgatum
Pavir.3KG544300 10.0kb downstream 10.0kb downstream 16351 true Chr03K: 69526413-69542763 Panicum virgatum
Pavir.3KG544300 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 69526413-69536412 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176881 5267 Panicoideae View MSA
124573945 5269 Grass View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain