Gene : Pavir.6NG070700 P. virgatum v4.1
Defline:  (1 of 4) 2.2.1.2 - Transaldolase / Glycerone transferase Genomic Order:  636
Name:  ? Pavir.6NG070700 Secondary Identifier:  ? PAC:37648019
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum NONOXIPENT-PWY Panicum virgatum pathologic  
Pvirgatum PENTOSE-P-PWY Panicum virgatum pathologic  
Pvirgatum PWY-5723 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6NG070700 0.5kb upstream 0.5kb upstream 5598 true Chr06N: 13452712-13458309 Panicum virgatum
Pavir.6NG070700 0.5kb upstream 0.5kb upstream 500 false Chr06N: 13457810-13458309 Panicum virgatum
Pavir.6NG070700 0.5kb downstream 0.5kb downstream 5598 true Chr06N: 13452212-13457809 Panicum virgatum
Pavir.6NG070700 0.5kb downstream 0.5kb downstream 500 false Chr06N: 13452212-13452711 Panicum virgatum
Pavir.6NG070700 1.0kb upstream 1.0kb upstream 6098 true Chr06N: 13452712-13458809 Panicum virgatum
Pavir.6NG070700 1.0kb upstream 1.0kb upstream 1000 false Chr06N: 13457810-13458809 Panicum virgatum
Pavir.6NG070700 1.0kb downstream 1.0kb downstream 6098 true Chr06N: 13451712-13457809 Panicum virgatum
Pavir.6NG070700 1.0kb downstream 1.0kb downstream 1000 false Chr06N: 13451712-13452711 Panicum virgatum
Pavir.6NG070700 2.0kb upstream 2.0kb upstream 7098 true Chr06N: 13452712-13459809 Panicum virgatum
Pavir.6NG070700 2.0kb upstream 2.0kb upstream 2000 false Chr06N: 13457810-13459809 Panicum virgatum
Pavir.6NG070700 2.0kb downstream 2.0kb downstream 7098 true Chr06N: 13450712-13457809 Panicum virgatum
Pavir.6NG070700 2.0kb downstream 2.0kb downstream 2000 false Chr06N: 13450712-13452711 Panicum virgatum
Pavir.6NG070700 5.0kb upstream 5.0kb upstream 10098 true Chr06N: 13452712-13462809 Panicum virgatum
Pavir.6NG070700 5.0kb upstream 5.0kb upstream 5000 false Chr06N: 13457810-13462809 Panicum virgatum
Pavir.6NG070700 5.0kb downstream 5.0kb downstream 10098 true Chr06N: 13447712-13457809 Panicum virgatum
Pavir.6NG070700 5.0kb downstream 5.0kb downstream 5000 false Chr06N: 13447712-13452711 Panicum virgatum
Pavir.6NG070700 10.0kb upstream 10.0kb upstream 15098 true Chr06N: 13452712-13467809 Panicum virgatum
Pavir.6NG070700 10.0kb upstream 10.0kb upstream 10000 false Chr06N: 13457810-13467809 Panicum virgatum
Pavir.6NG070700 10.0kb downstream 10.0kb downstream 15098 true Chr06N: 13442712-13457809 Panicum virgatum
Pavir.6NG070700 10.0kb downstream 10.0kb downstream 10000 false Chr06N: 13442712-13452711 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122098882 5267 Panicoideae Singleton cluster - no MSA
124395683 5269 Grass Singleton cluster - no MSA
122043979 5273 Angiosperm View MSA
121346789 5274 Embryophyte View MSA
123424119 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain