Gene : Thecc1EG024538 T. cacao v1.1
Defline:  (1 of 4) PTHR10183 - CALPAIN Genomic Order:  1493
Name:  ? Thecc1EG024538 Secondary Identifier:  ? PAC:27423530
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024538 0.5kb upstream 0.5kb upstream 9400 true scaffold_5: 26453314-26462713 Theobroma cacao
Thecc1EG024538 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 26462214-26462713 Theobroma cacao
Thecc1EG024538 0.5kb downstream 0.5kb downstream 9400 true scaffold_5: 26452814-26462213 Theobroma cacao
Thecc1EG024538 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 26452814-26453313 Theobroma cacao
Thecc1EG024538 1.0kb upstream 1.0kb upstream 9900 true scaffold_5: 26453314-26463213 Theobroma cacao
Thecc1EG024538 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 26462214-26463213 Theobroma cacao
Thecc1EG024538 1.0kb downstream 1.0kb downstream 9900 true scaffold_5: 26452314-26462213 Theobroma cacao
Thecc1EG024538 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 26452314-26453313 Theobroma cacao
Thecc1EG024538 2.0kb upstream 2.0kb upstream 10900 true scaffold_5: 26453314-26464213 Theobroma cacao
Thecc1EG024538 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 26462214-26464213 Theobroma cacao
Thecc1EG024538 2.0kb downstream 2.0kb downstream 10900 true scaffold_5: 26451314-26462213 Theobroma cacao
Thecc1EG024538 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 26451314-26453313 Theobroma cacao
Thecc1EG024538 5.0kb upstream 5.0kb upstream 13900 true scaffold_5: 26453314-26467213 Theobroma cacao
Thecc1EG024538 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 26462214-26467213 Theobroma cacao
Thecc1EG024538 5.0kb downstream 5.0kb downstream 13900 true scaffold_5: 26448314-26462213 Theobroma cacao
Thecc1EG024538 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 26448314-26453313 Theobroma cacao
Thecc1EG024538 10.0kb upstream 10.0kb upstream 18900 true scaffold_5: 26453314-26472213 Theobroma cacao
Thecc1EG024538 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 26462214-26472213 Theobroma cacao
Thecc1EG024538 10.0kb downstream 10.0kb downstream 18900 true scaffold_5: 26443314-26462213 Theobroma cacao
Thecc1EG024538 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 26443314-26453313 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836587 5264 Brassicales-Malvales View MSA
124338746 5266 SBM View MSA
124239848 5268 Malvidae View MSA
124064338 5270 Rosid View MSA
123744145 5271 Pentapetalae View MSA
122790435 5272 Eudicot View MSA
122044402 5273 Angiosperm View MSA
121345695 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain