Gene : Pavir.6NG070400 P. virgatum v4.1
Defline:  (1 of 4) PTHR10509:SF27 - PROTEIN COMT-1 Genomic Order:  633
Name:  ? Pavir.6NG070400 Secondary Identifier:  ? PAC:37648727
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-1121 Panicum virgatum pathologic  
Pvirgatum PWY-361 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6NG070400 0.5kb upstream 0.5kb upstream 4894 true Chr06N: 13415268-13420161 Panicum virgatum
Pavir.6NG070400 0.5kb upstream 0.5kb upstream 500 false Chr06N: 13415268-13415767 Panicum virgatum
Pavir.6NG070400 0.5kb downstream 0.5kb downstream 4894 true Chr06N: 13415768-13420661 Panicum virgatum
Pavir.6NG070400 0.5kb downstream 0.5kb downstream 500 false Chr06N: 13420162-13420661 Panicum virgatum
Pavir.6NG070400 1.0kb upstream 1.0kb upstream 5394 true Chr06N: 13414768-13420161 Panicum virgatum
Pavir.6NG070400 1.0kb upstream 1.0kb upstream 1000 false Chr06N: 13414768-13415767 Panicum virgatum
Pavir.6NG070400 1.0kb downstream 1.0kb downstream 5394 true Chr06N: 13415768-13421161 Panicum virgatum
Pavir.6NG070400 1.0kb downstream 1.0kb downstream 1000 false Chr06N: 13420162-13421161 Panicum virgatum
Pavir.6NG070400 2.0kb upstream 2.0kb upstream 6394 true Chr06N: 13413768-13420161 Panicum virgatum
Pavir.6NG070400 2.0kb upstream 2.0kb upstream 2000 false Chr06N: 13413768-13415767 Panicum virgatum
Pavir.6NG070400 2.0kb downstream 2.0kb downstream 6394 true Chr06N: 13415768-13422161 Panicum virgatum
Pavir.6NG070400 2.0kb downstream 2.0kb downstream 2000 false Chr06N: 13420162-13422161 Panicum virgatum
Pavir.6NG070400 5.0kb upstream 5.0kb upstream 9394 true Chr06N: 13410768-13420161 Panicum virgatum
Pavir.6NG070400 5.0kb upstream 5.0kb upstream 5000 false Chr06N: 13410768-13415767 Panicum virgatum
Pavir.6NG070400 5.0kb downstream 5.0kb downstream 9394 true Chr06N: 13415768-13425161 Panicum virgatum
Pavir.6NG070400 5.0kb downstream 5.0kb downstream 5000 false Chr06N: 13420162-13425161 Panicum virgatum
Pavir.6NG070400 10.0kb upstream 10.0kb upstream 14394 true Chr06N: 13405768-13420161 Panicum virgatum
Pavir.6NG070400 10.0kb upstream 10.0kb upstream 10000 false Chr06N: 13405768-13415767 Panicum virgatum
Pavir.6NG070400 10.0kb downstream 10.0kb downstream 14394 true Chr06N: 13415768-13430161 Panicum virgatum
Pavir.6NG070400 10.0kb downstream 10.0kb downstream 10000 false Chr06N: 13420162-13430161 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175186 5267 Panicoideae View MSA
124588740 5269 Grass View MSA
122046584 5273 Angiosperm View MSA
121345424 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain