Gene : Thecc1EG024944 T. cacao v1.1
Defline:  (1 of 1) PTHR13009:SF8 - AHSA1 PROTEIN Genomic Order:  1761
Name:  ? Thecc1EG024944 Secondary Identifier:  ? PAC:27423812
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024944 0.5kb upstream 0.5kb upstream 2713 true scaffold_5: 29696145-29698857 Theobroma cacao
Thecc1EG024944 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 29698358-29698857 Theobroma cacao
Thecc1EG024944 0.5kb downstream 0.5kb downstream 2713 true scaffold_5: 29695645-29698357 Theobroma cacao
Thecc1EG024944 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 29695645-29696144 Theobroma cacao
Thecc1EG024944 1.0kb upstream 1.0kb upstream 3213 true scaffold_5: 29696145-29699357 Theobroma cacao
Thecc1EG024944 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 29698358-29699357 Theobroma cacao
Thecc1EG024944 1.0kb downstream 1.0kb downstream 3213 true scaffold_5: 29695145-29698357 Theobroma cacao
Thecc1EG024944 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 29695145-29696144 Theobroma cacao
Thecc1EG024944 2.0kb upstream 2.0kb upstream 4213 true scaffold_5: 29696145-29700357 Theobroma cacao
Thecc1EG024944 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 29698358-29700357 Theobroma cacao
Thecc1EG024944 2.0kb downstream 2.0kb downstream 4213 true scaffold_5: 29694145-29698357 Theobroma cacao
Thecc1EG024944 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 29694145-29696144 Theobroma cacao
Thecc1EG024944 5.0kb upstream 5.0kb upstream 7213 true scaffold_5: 29696145-29703357 Theobroma cacao
Thecc1EG024944 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 29698358-29703357 Theobroma cacao
Thecc1EG024944 5.0kb downstream 5.0kb downstream 7213 true scaffold_5: 29691145-29698357 Theobroma cacao
Thecc1EG024944 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 29691145-29696144 Theobroma cacao
Thecc1EG024944 10.0kb upstream 10.0kb upstream 12213 true scaffold_5: 29696145-29708357 Theobroma cacao
Thecc1EG024944 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 29698358-29708357 Theobroma cacao
Thecc1EG024944 10.0kb downstream 10.0kb downstream 12213 true scaffold_5: 29686145-29698357 Theobroma cacao
Thecc1EG024944 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 29686145-29696144 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833704 5264 Brassicales-Malvales View MSA
124339593 5266 SBM View MSA
124237595 5268 Malvidae View MSA
124068494 5270 Rosid View MSA
123738281 5271 Pentapetalae View MSA
122785985 5272 Eudicot View MSA
122047142 5273 Angiosperm View MSA
121345580 5274 Embryophyte View MSA
123425106 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain