Gene : Thecc1EG024928 T. cacao v1.1
Defline:  (1 of 2) PTHR13871//PTHR13871:SF36 - THIOREDOXIN // SUBFAMILY NOT NAMED Genomic Order:  1747
Name:  ? Thecc1EG024928 Secondary Identifier:  ? PAC:27425236
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024928 0.5kb upstream 0.5kb upstream 2858 true scaffold_5: 29604337-29607194 Theobroma cacao
Thecc1EG024928 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 29604337-29604836 Theobroma cacao
Thecc1EG024928 0.5kb downstream 0.5kb downstream 2858 true scaffold_5: 29604837-29607694 Theobroma cacao
Thecc1EG024928 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 29607195-29607694 Theobroma cacao
Thecc1EG024928 1.0kb upstream 1.0kb upstream 3358 true scaffold_5: 29603837-29607194 Theobroma cacao
Thecc1EG024928 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 29603837-29604836 Theobroma cacao
Thecc1EG024928 1.0kb downstream 1.0kb downstream 3358 true scaffold_5: 29604837-29608194 Theobroma cacao
Thecc1EG024928 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 29607195-29608194 Theobroma cacao
Thecc1EG024928 2.0kb upstream 2.0kb upstream 4358 true scaffold_5: 29602837-29607194 Theobroma cacao
Thecc1EG024928 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 29602837-29604836 Theobroma cacao
Thecc1EG024928 2.0kb downstream 2.0kb downstream 4358 true scaffold_5: 29604837-29609194 Theobroma cacao
Thecc1EG024928 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 29607195-29609194 Theobroma cacao
Thecc1EG024928 5.0kb upstream 5.0kb upstream 7358 true scaffold_5: 29599837-29607194 Theobroma cacao
Thecc1EG024928 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 29599837-29604836 Theobroma cacao
Thecc1EG024928 5.0kb downstream 5.0kb downstream 7358 true scaffold_5: 29604837-29612194 Theobroma cacao
Thecc1EG024928 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 29607195-29612194 Theobroma cacao
Thecc1EG024928 10.0kb upstream 10.0kb upstream 12358 true scaffold_5: 29594837-29607194 Theobroma cacao
Thecc1EG024928 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 29594837-29604836 Theobroma cacao
Thecc1EG024928 10.0kb downstream 10.0kb downstream 12358 true scaffold_5: 29604837-29617194 Theobroma cacao
Thecc1EG024928 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 29607195-29617194 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827044 5264 Brassicales-Malvales View MSA
124347998 5266 SBM View MSA
124246584 5268 Malvidae View MSA
124073817 5270 Rosid View MSA
123749081 5271 Pentapetalae View MSA
122772976 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain