Gene : Pavir.5KG046800 P. virgatum v4.1
Defline:  (1 of 3) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase Genomic Order:  431
Name:  ? Pavir.5KG046800 Secondary Identifier:  ? PAC:37630290
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6124 Panicum virgatum pathologic  
Pvirgatum PWY-841 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG046800 0.5kb upstream 0.5kb upstream 7108 true Chr05K: 6808910-6816017 Panicum virgatum
Pavir.5KG046800 0.5kb upstream 0.5kb upstream 500 false Chr05K: 6815518-6816017 Panicum virgatum
Pavir.5KG046800 0.5kb downstream 0.5kb downstream 7108 true Chr05K: 6808410-6815517 Panicum virgatum
Pavir.5KG046800 0.5kb downstream 0.5kb downstream 500 false Chr05K: 6808410-6808909 Panicum virgatum
Pavir.5KG046800 1.0kb upstream 1.0kb upstream 7608 true Chr05K: 6808910-6816517 Panicum virgatum
Pavir.5KG046800 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 6815518-6816517 Panicum virgatum
Pavir.5KG046800 1.0kb downstream 1.0kb downstream 7608 true Chr05K: 6807910-6815517 Panicum virgatum
Pavir.5KG046800 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 6807910-6808909 Panicum virgatum
Pavir.5KG046800 2.0kb upstream 2.0kb upstream 8608 true Chr05K: 6808910-6817517 Panicum virgatum
Pavir.5KG046800 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 6815518-6817517 Panicum virgatum
Pavir.5KG046800 2.0kb downstream 2.0kb downstream 8608 true Chr05K: 6806910-6815517 Panicum virgatum
Pavir.5KG046800 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 6806910-6808909 Panicum virgatum
Pavir.5KG046800 5.0kb upstream 5.0kb upstream 11608 true Chr05K: 6808910-6820517 Panicum virgatum
Pavir.5KG046800 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 6815518-6820517 Panicum virgatum
Pavir.5KG046800 5.0kb downstream 5.0kb downstream 11608 true Chr05K: 6803910-6815517 Panicum virgatum
Pavir.5KG046800 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 6803910-6808909 Panicum virgatum
Pavir.5KG046800 10.0kb upstream 10.0kb upstream 16608 true Chr05K: 6808910-6825517 Panicum virgatum
Pavir.5KG046800 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 6815518-6825517 Panicum virgatum
Pavir.5KG046800 10.0kb downstream 10.0kb downstream 16608 true Chr05K: 6798910-6815517 Panicum virgatum
Pavir.5KG046800 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 6798910-6808909 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196712 5267 Panicoideae View MSA
124580705 5269 Grass View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain