Gene : Thecc1EG024901 T. cacao v1.1
Defline:  (1 of 2) PTHR33493//PTHR33493:SF2 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  1726
Name:  ? Thecc1EG024901 Secondary Identifier:  ? PAC:27423512
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024901 0.5kb upstream 0.5kb upstream 2608 true scaffold_5: 29435514-29438121 Theobroma cacao
Thecc1EG024901 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 29437622-29438121 Theobroma cacao
Thecc1EG024901 0.5kb downstream 0.5kb downstream 2608 true scaffold_5: 29435014-29437621 Theobroma cacao
Thecc1EG024901 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 29435014-29435513 Theobroma cacao
Thecc1EG024901 1.0kb upstream 1.0kb upstream 3108 true scaffold_5: 29435514-29438621 Theobroma cacao
Thecc1EG024901 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 29437622-29438621 Theobroma cacao
Thecc1EG024901 1.0kb downstream 1.0kb downstream 3108 true scaffold_5: 29434514-29437621 Theobroma cacao
Thecc1EG024901 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 29434514-29435513 Theobroma cacao
Thecc1EG024901 2.0kb upstream 2.0kb upstream 4108 true scaffold_5: 29435514-29439621 Theobroma cacao
Thecc1EG024901 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 29437622-29439621 Theobroma cacao
Thecc1EG024901 2.0kb downstream 2.0kb downstream 4108 true scaffold_5: 29433514-29437621 Theobroma cacao
Thecc1EG024901 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 29433514-29435513 Theobroma cacao
Thecc1EG024901 5.0kb upstream 5.0kb upstream 7108 true scaffold_5: 29435514-29442621 Theobroma cacao
Thecc1EG024901 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 29437622-29442621 Theobroma cacao
Thecc1EG024901 5.0kb downstream 5.0kb downstream 7108 true scaffold_5: 29430514-29437621 Theobroma cacao
Thecc1EG024901 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 29430514-29435513 Theobroma cacao
Thecc1EG024901 10.0kb upstream 10.0kb upstream 12108 true scaffold_5: 29435514-29447621 Theobroma cacao
Thecc1EG024901 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 29437622-29447621 Theobroma cacao
Thecc1EG024901 10.0kb downstream 10.0kb downstream 12108 true scaffold_5: 29425514-29437621 Theobroma cacao
Thecc1EG024901 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 29425514-29435513 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820189 5264 Brassicales-Malvales Singleton cluster - no MSA
124316411 5266 SBM Singleton cluster - no MSA
124165233 5268 Malvidae Singleton cluster - no MSA
123888928 5270 Rosid Singleton cluster - no MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain