Gene : Thecc1EG024902 T. cacao v1.1
Defline:  (1 of 1) 1.14.19.6 - Delta(12)-fatty-acid desaturase / Oleoyl-CoA Delta(12) desaturase Genomic Order:  1727
Name:  ? Thecc1EG024902 Secondary Identifier:  ? PAC:27421945
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5995 Theobroma cacao pathologic  
Tcacao PWY-762 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024902 0.5kb upstream 0.5kb upstream 4931 true scaffold_5: 29460326-29465256 Theobroma cacao
Thecc1EG024902 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 29460326-29460825 Theobroma cacao
Thecc1EG024902 0.5kb downstream 0.5kb downstream 4931 true scaffold_5: 29460826-29465756 Theobroma cacao
Thecc1EG024902 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 29465257-29465756 Theobroma cacao
Thecc1EG024902 1.0kb upstream 1.0kb upstream 5431 true scaffold_5: 29459826-29465256 Theobroma cacao
Thecc1EG024902 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 29459826-29460825 Theobroma cacao
Thecc1EG024902 1.0kb downstream 1.0kb downstream 5431 true scaffold_5: 29460826-29466256 Theobroma cacao
Thecc1EG024902 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 29465257-29466256 Theobroma cacao
Thecc1EG024902 2.0kb upstream 2.0kb upstream 6431 true scaffold_5: 29458826-29465256 Theobroma cacao
Thecc1EG024902 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 29458826-29460825 Theobroma cacao
Thecc1EG024902 2.0kb downstream 2.0kb downstream 6431 true scaffold_5: 29460826-29467256 Theobroma cacao
Thecc1EG024902 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 29465257-29467256 Theobroma cacao
Thecc1EG024902 5.0kb upstream 5.0kb upstream 9431 true scaffold_5: 29455826-29465256 Theobroma cacao
Thecc1EG024902 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 29455826-29460825 Theobroma cacao
Thecc1EG024902 5.0kb downstream 5.0kb downstream 9431 true scaffold_5: 29460826-29470256 Theobroma cacao
Thecc1EG024902 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 29465257-29470256 Theobroma cacao
Thecc1EG024902 10.0kb upstream 10.0kb upstream 14431 true scaffold_5: 29450826-29465256 Theobroma cacao
Thecc1EG024902 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 29450826-29460825 Theobroma cacao
Thecc1EG024902 10.0kb downstream 10.0kb downstream 14431 true scaffold_5: 29460826-29475256 Theobroma cacao
Thecc1EG024902 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 29465257-29475256 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
123833329 5264 Brassicales-Malvales View MSA
124337061 5266 SBM View MSA
124236888 5268 Malvidae View MSA
124074119 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain