Gene : Pavir.5KG125900 P. virgatum v4.1
Defline:  (1 of 2) PTHR11777:SF7 - THREONYL AND ALANYL TRNA SYNTHETASE SECOND ADDITIONAL DOMAIN-CONTAINING PROTEIN Genomic Order:  1159
Name:  ? Pavir.5KG125900 Secondary Identifier:  ? PAC:37632010
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG125900 0.5kb upstream 0.5kb upstream 4594 true Chr05K: 15383591-15388184 Panicum virgatum
Pavir.5KG125900 0.5kb upstream 0.5kb upstream 500 false Chr05K: 15383591-15384090 Panicum virgatum
Pavir.5KG125900 0.5kb downstream 0.5kb downstream 4594 true Chr05K: 15384091-15388684 Panicum virgatum
Pavir.5KG125900 0.5kb downstream 0.5kb downstream 500 false Chr05K: 15388185-15388684 Panicum virgatum
Pavir.5KG125900 1.0kb upstream 1.0kb upstream 5094 true Chr05K: 15383091-15388184 Panicum virgatum
Pavir.5KG125900 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 15383091-15384090 Panicum virgatum
Pavir.5KG125900 1.0kb downstream 1.0kb downstream 5094 true Chr05K: 15384091-15389184 Panicum virgatum
Pavir.5KG125900 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 15388185-15389184 Panicum virgatum
Pavir.5KG125900 2.0kb upstream 2.0kb upstream 6094 true Chr05K: 15382091-15388184 Panicum virgatum
Pavir.5KG125900 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 15382091-15384090 Panicum virgatum
Pavir.5KG125900 2.0kb downstream 2.0kb downstream 6094 true Chr05K: 15384091-15390184 Panicum virgatum
Pavir.5KG125900 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 15388185-15390184 Panicum virgatum
Pavir.5KG125900 5.0kb upstream 5.0kb upstream 9094 true Chr05K: 15379091-15388184 Panicum virgatum
Pavir.5KG125900 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 15379091-15384090 Panicum virgatum
Pavir.5KG125900 5.0kb downstream 5.0kb downstream 9094 true Chr05K: 15384091-15393184 Panicum virgatum
Pavir.5KG125900 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 15388185-15393184 Panicum virgatum
Pavir.5KG125900 10.0kb upstream 10.0kb upstream 14094 true Chr05K: 15374091-15388184 Panicum virgatum
Pavir.5KG125900 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 15374091-15384090 Panicum virgatum
Pavir.5KG125900 10.0kb downstream 10.0kb downstream 14094 true Chr05K: 15384091-15398184 Panicum virgatum
Pavir.5KG125900 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 15388185-15398184 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041267 5273 Angiosperm View MSA
122175505 5267 Panicoideae View MSA
124575580 5269 Grass View MSA
121346902 5274 Embryophyte View MSA
123425374 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain