Gene : Pavir.5KG187500 P. virgatum v4.1
Defline:  (1 of 1) PF00566//PF08159 - Rab-GTPase-TBC domain (RabGAP-TBC) // NUC153 domain (NUC153) Genomic Order:  1727
Name:  ? Pavir.5KG187500 Secondary Identifier:  ? PAC:37632069
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG187500 0.5kb upstream 0.5kb upstream 11899 true Chr05K: 23688412-23700310 Panicum virgatum
Pavir.5KG187500 0.5kb upstream 0.5kb upstream 500 false Chr05K: 23688412-23688911 Panicum virgatum
Pavir.5KG187500 0.5kb downstream 0.5kb downstream 11899 true Chr05K: 23688912-23700810 Panicum virgatum
Pavir.5KG187500 0.5kb downstream 0.5kb downstream 500 false Chr05K: 23700311-23700810 Panicum virgatum
Pavir.5KG187500 1.0kb upstream 1.0kb upstream 12399 true Chr05K: 23687912-23700310 Panicum virgatum
Pavir.5KG187500 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 23687912-23688911 Panicum virgatum
Pavir.5KG187500 1.0kb downstream 1.0kb downstream 12399 true Chr05K: 23688912-23701310 Panicum virgatum
Pavir.5KG187500 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 23700311-23701310 Panicum virgatum
Pavir.5KG187500 2.0kb upstream 2.0kb upstream 13399 true Chr05K: 23686912-23700310 Panicum virgatum
Pavir.5KG187500 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 23686912-23688911 Panicum virgatum
Pavir.5KG187500 2.0kb downstream 2.0kb downstream 13399 true Chr05K: 23688912-23702310 Panicum virgatum
Pavir.5KG187500 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 23700311-23702310 Panicum virgatum
Pavir.5KG187500 5.0kb upstream 5.0kb upstream 16399 true Chr05K: 23683912-23700310 Panicum virgatum
Pavir.5KG187500 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 23683912-23688911 Panicum virgatum
Pavir.5KG187500 5.0kb downstream 5.0kb downstream 16399 true Chr05K: 23688912-23705310 Panicum virgatum
Pavir.5KG187500 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 23700311-23705310 Panicum virgatum
Pavir.5KG187500 10.0kb upstream 10.0kb upstream 21399 true Chr05K: 23678912-23700310 Panicum virgatum
Pavir.5KG187500 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 23678912-23688911 Panicum virgatum
Pavir.5KG187500 10.0kb downstream 10.0kb downstream 21399 true Chr05K: 23688912-23710310 Panicum virgatum
Pavir.5KG187500 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 23700311-23710310 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122094546 5267 Panicoideae Singleton cluster - no MSA
124391770 5269 Grass Singleton cluster - no MSA
122046385 5273 Angiosperm View MSA
121346233 5274 Embryophyte View MSA
123423804 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain