Gene : Thecc1EG024828 T. cacao v1.1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF112 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BHLH48-RELATED Genomic Order:  1669
Name:  ? Thecc1EG024828 Secondary Identifier:  ? PAC:27424642
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024828 0.5kb upstream 0.5kb upstream 6091 true scaffold_5: 28968467-28974557 Theobroma cacao
Thecc1EG024828 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 28974058-28974557 Theobroma cacao
Thecc1EG024828 0.5kb downstream 0.5kb downstream 6091 true scaffold_5: 28967967-28974057 Theobroma cacao
Thecc1EG024828 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 28967967-28968466 Theobroma cacao
Thecc1EG024828 1.0kb upstream 1.0kb upstream 6591 true scaffold_5: 28968467-28975057 Theobroma cacao
Thecc1EG024828 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 28974058-28975057 Theobroma cacao
Thecc1EG024828 1.0kb downstream 1.0kb downstream 6591 true scaffold_5: 28967467-28974057 Theobroma cacao
Thecc1EG024828 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 28967467-28968466 Theobroma cacao
Thecc1EG024828 2.0kb upstream 2.0kb upstream 7591 true scaffold_5: 28968467-28976057 Theobroma cacao
Thecc1EG024828 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 28974058-28976057 Theobroma cacao
Thecc1EG024828 2.0kb downstream 2.0kb downstream 7591 true scaffold_5: 28966467-28974057 Theobroma cacao
Thecc1EG024828 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 28966467-28968466 Theobroma cacao
Thecc1EG024828 5.0kb upstream 5.0kb upstream 10591 true scaffold_5: 28968467-28979057 Theobroma cacao
Thecc1EG024828 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 28974058-28979057 Theobroma cacao
Thecc1EG024828 5.0kb downstream 5.0kb downstream 10591 true scaffold_5: 28963467-28974057 Theobroma cacao
Thecc1EG024828 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 28963467-28968466 Theobroma cacao
Thecc1EG024828 10.0kb upstream 10.0kb upstream 15591 true scaffold_5: 28968467-28984057 Theobroma cacao
Thecc1EG024828 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 28974058-28984057 Theobroma cacao
Thecc1EG024828 10.0kb downstream 10.0kb downstream 15591 true scaffold_5: 28958467-28974057 Theobroma cacao
Thecc1EG024828 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 28958467-28968466 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839829 5264 Brassicales-Malvales View MSA
124338408 5266 SBM View MSA
124240719 5268 Malvidae View MSA
124063738 5270 Rosid View MSA
123737117 5271 Pentapetalae View MSA
122769887 5272 Eudicot View MSA
122044005 5273 Angiosperm View MSA
121310224 5274 Embryophyte View MSA
123347772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain