Gene : Thecc1EG024825 T. cacao v1.1
Defline:  (1 of 1) PTHR31344//PTHR31344:SF4 - FAMILY NOT NAMED // NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN Genomic Order:  1666
Name:  ? Thecc1EG024825 Secondary Identifier:  ? PAC:27425158
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024825 0.5kb upstream 0.5kb upstream 7228 true scaffold_5: 28941879-28949106 Theobroma cacao
Thecc1EG024825 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 28948607-28949106 Theobroma cacao
Thecc1EG024825 0.5kb downstream 0.5kb downstream 7228 true scaffold_5: 28941379-28948606 Theobroma cacao
Thecc1EG024825 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 28941379-28941878 Theobroma cacao
Thecc1EG024825 1.0kb upstream 1.0kb upstream 7728 true scaffold_5: 28941879-28949606 Theobroma cacao
Thecc1EG024825 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 28948607-28949606 Theobroma cacao
Thecc1EG024825 1.0kb downstream 1.0kb downstream 7728 true scaffold_5: 28940879-28948606 Theobroma cacao
Thecc1EG024825 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 28940879-28941878 Theobroma cacao
Thecc1EG024825 2.0kb upstream 2.0kb upstream 8728 true scaffold_5: 28941879-28950606 Theobroma cacao
Thecc1EG024825 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 28948607-28950606 Theobroma cacao
Thecc1EG024825 2.0kb downstream 2.0kb downstream 8728 true scaffold_5: 28939879-28948606 Theobroma cacao
Thecc1EG024825 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 28939879-28941878 Theobroma cacao
Thecc1EG024825 5.0kb upstream 5.0kb upstream 11728 true scaffold_5: 28941879-28953606 Theobroma cacao
Thecc1EG024825 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 28948607-28953606 Theobroma cacao
Thecc1EG024825 5.0kb downstream 5.0kb downstream 11728 true scaffold_5: 28936879-28948606 Theobroma cacao
Thecc1EG024825 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 28936879-28941878 Theobroma cacao
Thecc1EG024825 10.0kb upstream 10.0kb upstream 16728 true scaffold_5: 28941879-28958606 Theobroma cacao
Thecc1EG024825 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 28948607-28958606 Theobroma cacao
Thecc1EG024825 10.0kb downstream 10.0kb downstream 16728 true scaffold_5: 28931879-28948606 Theobroma cacao
Thecc1EG024825 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 28931879-28941878 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836588 5264 Brassicales-Malvales View MSA
124338356 5266 SBM View MSA
124240822 5268 Malvidae View MSA
124068078 5270 Rosid View MSA
123737150 5271 Pentapetalae View MSA
122789303 5272 Eudicot View MSA
122047501 5273 Angiosperm View MSA
121349213 5274 Embryophyte View MSA
123425563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain