Gene : Pavir.5KG156300 P. virgatum v4.1
Defline:  (1 of 4) PTHR31956:SF2 - NON-SPECIFIC PHOSPHOLIPASE C6 Genomic Order:  1440
Name:  ? Pavir.5KG156300 Secondary Identifier:  ? PAC:37637802
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum LIPASYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG156300 0.5kb upstream 0.5kb upstream 3024 true Chr05K: 20699229-20702252 Panicum virgatum
Pavir.5KG156300 0.5kb upstream 0.5kb upstream 500 false Chr05K: 20699229-20699728 Panicum virgatum
Pavir.5KG156300 0.5kb downstream 0.5kb downstream 3024 true Chr05K: 20699729-20702752 Panicum virgatum
Pavir.5KG156300 0.5kb downstream 0.5kb downstream 500 false Chr05K: 20702253-20702752 Panicum virgatum
Pavir.5KG156300 1.0kb upstream 1.0kb upstream 3524 true Chr05K: 20698729-20702252 Panicum virgatum
Pavir.5KG156300 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 20698729-20699728 Panicum virgatum
Pavir.5KG156300 1.0kb downstream 1.0kb downstream 3524 true Chr05K: 20699729-20703252 Panicum virgatum
Pavir.5KG156300 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 20702253-20703252 Panicum virgatum
Pavir.5KG156300 2.0kb upstream 2.0kb upstream 4524 true Chr05K: 20697729-20702252 Panicum virgatum
Pavir.5KG156300 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 20697729-20699728 Panicum virgatum
Pavir.5KG156300 2.0kb downstream 2.0kb downstream 4524 true Chr05K: 20699729-20704252 Panicum virgatum
Pavir.5KG156300 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 20702253-20704252 Panicum virgatum
Pavir.5KG156300 5.0kb upstream 5.0kb upstream 7524 true Chr05K: 20694729-20702252 Panicum virgatum
Pavir.5KG156300 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 20694729-20699728 Panicum virgatum
Pavir.5KG156300 5.0kb downstream 5.0kb downstream 7524 true Chr05K: 20699729-20707252 Panicum virgatum
Pavir.5KG156300 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 20702253-20707252 Panicum virgatum
Pavir.5KG156300 10.0kb upstream 10.0kb upstream 12524 true Chr05K: 20689729-20702252 Panicum virgatum
Pavir.5KG156300 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 20689729-20699728 Panicum virgatum
Pavir.5KG156300 10.0kb downstream 10.0kb downstream 12524 true Chr05K: 20699729-20712252 Panicum virgatum
Pavir.5KG156300 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 20702253-20712252 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184636 5267 Panicoideae View MSA
124577445 5269 Grass View MSA
122046381 5273 Angiosperm View MSA
121310596 5274 Embryophyte View MSA
123348041 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain