Gene : Thecc1EG024831 T. cacao v1.1
Defline:  (1 of 4) PTHR12290 - CORNICHON-RELATED Genomic Order:  1671
Name:  ? Thecc1EG024831 Secondary Identifier:  ? PAC:27424661
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024831 0.5kb upstream 0.5kb upstream 3647 true scaffold_5: 29000707-29004353 Theobroma cacao
Thecc1EG024831 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 29003854-29004353 Theobroma cacao
Thecc1EG024831 0.5kb downstream 0.5kb downstream 3647 true scaffold_5: 29000207-29003853 Theobroma cacao
Thecc1EG024831 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 29000207-29000706 Theobroma cacao
Thecc1EG024831 1.0kb upstream 1.0kb upstream 4147 true scaffold_5: 29000707-29004853 Theobroma cacao
Thecc1EG024831 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 29003854-29004853 Theobroma cacao
Thecc1EG024831 1.0kb downstream 1.0kb downstream 4147 true scaffold_5: 28999707-29003853 Theobroma cacao
Thecc1EG024831 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 28999707-29000706 Theobroma cacao
Thecc1EG024831 2.0kb upstream 2.0kb upstream 5147 true scaffold_5: 29000707-29005853 Theobroma cacao
Thecc1EG024831 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 29003854-29005853 Theobroma cacao
Thecc1EG024831 2.0kb downstream 2.0kb downstream 5147 true scaffold_5: 28998707-29003853 Theobroma cacao
Thecc1EG024831 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 28998707-29000706 Theobroma cacao
Thecc1EG024831 5.0kb upstream 5.0kb upstream 8147 true scaffold_5: 29000707-29008853 Theobroma cacao
Thecc1EG024831 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 29003854-29008853 Theobroma cacao
Thecc1EG024831 5.0kb downstream 5.0kb downstream 8147 true scaffold_5: 28995707-29003853 Theobroma cacao
Thecc1EG024831 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 28995707-29000706 Theobroma cacao
Thecc1EG024831 10.0kb upstream 10.0kb upstream 13147 true scaffold_5: 29000707-29013853 Theobroma cacao
Thecc1EG024831 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 29003854-29013853 Theobroma cacao
Thecc1EG024831 10.0kb downstream 10.0kb downstream 13147 true scaffold_5: 28990707-29003853 Theobroma cacao
Thecc1EG024831 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 28990707-29000706 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831337 5264 Brassicales-Malvales View MSA
124339876 5266 SBM View MSA
124242420 5268 Malvidae View MSA
124067439 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain