Gene : Thecc1EG024797 T. cacao v1.1

Defline:  (1 of 1) PTHR32060//PTHR32060:SF5 - FAMILY NOT NAMED // PEPTIDASE S41 FAMILY PROTEIN Genomic Order:  1651
Name:  ? Thecc1EG024797 Secondary Identifier:  ? PAC:27421481

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024797 0.5kb upstream 0.5kb upstream 6421 true scaffold_5: 28701541-28707961 Theobroma cacao
Thecc1EG024797 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 28701541-28702040 Theobroma cacao
Thecc1EG024797 0.5kb downstream 0.5kb downstream 6421 true scaffold_5: 28702041-28708461 Theobroma cacao
Thecc1EG024797 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 28707962-28708461 Theobroma cacao
Thecc1EG024797 1.0kb upstream 1.0kb upstream 6921 true scaffold_5: 28701041-28707961 Theobroma cacao
Thecc1EG024797 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 28701041-28702040 Theobroma cacao
Thecc1EG024797 1.0kb downstream 1.0kb downstream 6921 true scaffold_5: 28702041-28708961 Theobroma cacao
Thecc1EG024797 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 28707962-28708961 Theobroma cacao
Thecc1EG024797 2.0kb upstream 2.0kb upstream 7921 true scaffold_5: 28700041-28707961 Theobroma cacao
Thecc1EG024797 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 28700041-28702040 Theobroma cacao
Thecc1EG024797 2.0kb downstream 2.0kb downstream 7921 true scaffold_5: 28702041-28709961 Theobroma cacao
Thecc1EG024797 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 28707962-28709961 Theobroma cacao
Thecc1EG024797 5.0kb upstream 5.0kb upstream 10921 true scaffold_5: 28697041-28707961 Theobroma cacao
Thecc1EG024797 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 28697041-28702040 Theobroma cacao
Thecc1EG024797 5.0kb downstream 5.0kb downstream 10921 true scaffold_5: 28702041-28712961 Theobroma cacao
Thecc1EG024797 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 28707962-28712961 Theobroma cacao
Thecc1EG024797 10.0kb upstream 10.0kb upstream 15921 true scaffold_5: 28692041-28707961 Theobroma cacao
Thecc1EG024797 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 28692041-28702040 Theobroma cacao
Thecc1EG024797 10.0kb downstream 10.0kb downstream 15921 true scaffold_5: 28702041-28717961 Theobroma cacao
Thecc1EG024797 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 28707962-28717961 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833736 5264 Brassicales-Malvales View MSA
124344326 5266 SBM View MSA
124241182 5268 Malvidae View MSA
124067305 5270 Rosid View MSA
123750616 5271 Pentapetalae View MSA
122792134 5272 Eudicot View MSA
122042962 5273 Angiosperm View MSA
121346288 5274 Embryophyte View MSA
123424698 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain