Gene : Pavir.5KG233300 P. virgatum v4.1
Defline:  (1 of 4) K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) Genomic Order:  2142
Name:  ? Pavir.5KG233300 Secondary Identifier:  ? PAC:37637909
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARO-PWY Panicum virgatum pathologic  
Pvirgatum PWY-6163 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG233300 0.5kb upstream 0.5kb upstream 12826 true Chr05K: 32821835-32834660 Panicum virgatum
Pavir.5KG233300 0.5kb upstream 0.5kb upstream 500 false Chr05K: 32834161-32834660 Panicum virgatum
Pavir.5KG233300 0.5kb downstream 0.5kb downstream 12826 true Chr05K: 32821335-32834160 Panicum virgatum
Pavir.5KG233300 0.5kb downstream 0.5kb downstream 500 false Chr05K: 32821335-32821834 Panicum virgatum
Pavir.5KG233300 1.0kb upstream 1.0kb upstream 13326 true Chr05K: 32821835-32835160 Panicum virgatum
Pavir.5KG233300 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 32834161-32835160 Panicum virgatum
Pavir.5KG233300 1.0kb downstream 1.0kb downstream 13326 true Chr05K: 32820835-32834160 Panicum virgatum
Pavir.5KG233300 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 32820835-32821834 Panicum virgatum
Pavir.5KG233300 2.0kb upstream 2.0kb upstream 14326 true Chr05K: 32821835-32836160 Panicum virgatum
Pavir.5KG233300 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 32834161-32836160 Panicum virgatum
Pavir.5KG233300 2.0kb downstream 2.0kb downstream 14326 true Chr05K: 32819835-32834160 Panicum virgatum
Pavir.5KG233300 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 32819835-32821834 Panicum virgatum
Pavir.5KG233300 5.0kb upstream 5.0kb upstream 17326 true Chr05K: 32821835-32839160 Panicum virgatum
Pavir.5KG233300 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 32834161-32839160 Panicum virgatum
Pavir.5KG233300 5.0kb downstream 5.0kb downstream 17326 true Chr05K: 32816835-32834160 Panicum virgatum
Pavir.5KG233300 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 32816835-32821834 Panicum virgatum
Pavir.5KG233300 10.0kb upstream 10.0kb upstream 22326 true Chr05K: 32821835-32844160 Panicum virgatum
Pavir.5KG233300 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 32834161-32844160 Panicum virgatum
Pavir.5KG233300 10.0kb downstream 10.0kb downstream 22326 true Chr05K: 32811835-32834160 Panicum virgatum
Pavir.5KG233300 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 32811835-32821834 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189124 5267 Panicoideae View MSA
124570353 5269 Grass View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain