Gene : Thecc1EG024782 T. cacao v1.1
Defline:  (1 of 1) K02999 - DNA-directed RNA polymerase I subunit RPA1 (RPA1, POLR1A) Genomic Order:  1645
Name:  ? Thecc1EG024782 Secondary Identifier:  ? PAC:27422809
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024782 0.5kb upstream 0.5kb upstream 21660 true scaffold_5: 28525837-28547496 Theobroma cacao
Thecc1EG024782 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 28525837-28526336 Theobroma cacao
Thecc1EG024782 0.5kb downstream 0.5kb downstream 21660 true scaffold_5: 28526337-28547996 Theobroma cacao
Thecc1EG024782 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 28547497-28547996 Theobroma cacao
Thecc1EG024782 1.0kb upstream 1.0kb upstream 22160 true scaffold_5: 28525337-28547496 Theobroma cacao
Thecc1EG024782 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 28525337-28526336 Theobroma cacao
Thecc1EG024782 1.0kb downstream 1.0kb downstream 22160 true scaffold_5: 28526337-28548496 Theobroma cacao
Thecc1EG024782 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 28547497-28548496 Theobroma cacao
Thecc1EG024782 2.0kb upstream 2.0kb upstream 23160 true scaffold_5: 28524337-28547496 Theobroma cacao
Thecc1EG024782 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 28524337-28526336 Theobroma cacao
Thecc1EG024782 2.0kb downstream 2.0kb downstream 23160 true scaffold_5: 28526337-28549496 Theobroma cacao
Thecc1EG024782 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 28547497-28549496 Theobroma cacao
Thecc1EG024782 5.0kb upstream 5.0kb upstream 26160 true scaffold_5: 28521337-28547496 Theobroma cacao
Thecc1EG024782 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 28521337-28526336 Theobroma cacao
Thecc1EG024782 5.0kb downstream 5.0kb downstream 26160 true scaffold_5: 28526337-28552496 Theobroma cacao
Thecc1EG024782 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 28547497-28552496 Theobroma cacao
Thecc1EG024782 10.0kb upstream 10.0kb upstream 31160 true scaffold_5: 28516337-28547496 Theobroma cacao
Thecc1EG024782 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 28516337-28526336 Theobroma cacao
Thecc1EG024782 10.0kb downstream 10.0kb downstream 31160 true scaffold_5: 28526337-28557496 Theobroma cacao
Thecc1EG024782 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 28547497-28557496 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832966 5264 Brassicales-Malvales View MSA
124340101 5266 SBM View MSA
124240607 5268 Malvidae View MSA
124068682 5270 Rosid View MSA
123740783 5271 Pentapetalae View MSA
122786544 5272 Eudicot View MSA
122045680 5273 Angiosperm View MSA
121344248 5274 Embryophyte View MSA
123424891 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain