Gene : Pavir.5KG208500 P. virgatum v4.1
Defline:  (1 of 35) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1918
Name:  ? Pavir.5KG208500 Secondary Identifier:  ? PAC:37631578
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG208500 0.5kb upstream 0.5kb upstream 4622 true Chr05K: 27301016-27305637 Panicum virgatum
Pavir.5KG208500 0.5kb upstream 0.5kb upstream 500 false Chr05K: 27305138-27305637 Panicum virgatum
Pavir.5KG208500 0.5kb downstream 0.5kb downstream 4622 true Chr05K: 27300516-27305137 Panicum virgatum
Pavir.5KG208500 0.5kb downstream 0.5kb downstream 500 false Chr05K: 27300516-27301015 Panicum virgatum
Pavir.5KG208500 1.0kb upstream 1.0kb upstream 5122 true Chr05K: 27301016-27306137 Panicum virgatum
Pavir.5KG208500 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 27305138-27306137 Panicum virgatum
Pavir.5KG208500 1.0kb downstream 1.0kb downstream 5122 true Chr05K: 27300016-27305137 Panicum virgatum
Pavir.5KG208500 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 27300016-27301015 Panicum virgatum
Pavir.5KG208500 2.0kb upstream 2.0kb upstream 6122 true Chr05K: 27301016-27307137 Panicum virgatum
Pavir.5KG208500 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 27305138-27307137 Panicum virgatum
Pavir.5KG208500 2.0kb downstream 2.0kb downstream 6122 true Chr05K: 27299016-27305137 Panicum virgatum
Pavir.5KG208500 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 27299016-27301015 Panicum virgatum
Pavir.5KG208500 5.0kb upstream 5.0kb upstream 9122 true Chr05K: 27301016-27310137 Panicum virgatum
Pavir.5KG208500 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 27305138-27310137 Panicum virgatum
Pavir.5KG208500 5.0kb downstream 5.0kb downstream 9122 true Chr05K: 27296016-27305137 Panicum virgatum
Pavir.5KG208500 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 27296016-27301015 Panicum virgatum
Pavir.5KG208500 10.0kb upstream 10.0kb upstream 14122 true Chr05K: 27301016-27315137 Panicum virgatum
Pavir.5KG208500 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 27305138-27315137 Panicum virgatum
Pavir.5KG208500 10.0kb downstream 10.0kb downstream 14122 true Chr05K: 27291016-27305137 Panicum virgatum
Pavir.5KG208500 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 27291016-27301015 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184063 5267 Panicoideae View MSA
124584586 5269 Grass View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain