Gene : Pavir.5KG198800 P. virgatum v4.1
Defline:  (1 of 2) 1.1.1.3//2.7.2.4 - Homoserine dehydrogenase // Aspartate kinase / Aspartokinase Genomic Order:  1830
Name:  ? Pavir.5KG198800 Secondary Identifier:  ? PAC:37635287
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum HOMOSERSYN-PWY Panicum virgatum pathologic  
Pvirgatum PWY-3001 Panicum virgatum pathologic  
Pvirgatum PWY-5097 Panicum virgatum pathologic  
Pvirgatum PWY-724 Panicum virgatum pathologic  
Pvirgatum THRESYN-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG198800 0.5kb upstream 0.5kb upstream 29188 true Chr05K: 25241337-25270524 Panicum virgatum
Pavir.5KG198800 0.5kb upstream 0.5kb upstream 500 false Chr05K: 25270025-25270524 Panicum virgatum
Pavir.5KG198800 0.5kb downstream 0.5kb downstream 29188 true Chr05K: 25240837-25270024 Panicum virgatum
Pavir.5KG198800 0.5kb downstream 0.5kb downstream 500 false Chr05K: 25240837-25241336 Panicum virgatum
Pavir.5KG198800 1.0kb upstream 1.0kb upstream 29688 true Chr05K: 25241337-25271024 Panicum virgatum
Pavir.5KG198800 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 25270025-25271024 Panicum virgatum
Pavir.5KG198800 1.0kb downstream 1.0kb downstream 29688 true Chr05K: 25240337-25270024 Panicum virgatum
Pavir.5KG198800 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 25240337-25241336 Panicum virgatum
Pavir.5KG198800 2.0kb upstream 2.0kb upstream 30688 true Chr05K: 25241337-25272024 Panicum virgatum
Pavir.5KG198800 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 25270025-25272024 Panicum virgatum
Pavir.5KG198800 2.0kb downstream 2.0kb downstream 30688 true Chr05K: 25239337-25270024 Panicum virgatum
Pavir.5KG198800 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 25239337-25241336 Panicum virgatum
Pavir.5KG198800 5.0kb upstream 5.0kb upstream 33688 true Chr05K: 25241337-25275024 Panicum virgatum
Pavir.5KG198800 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 25270025-25275024 Panicum virgatum
Pavir.5KG198800 5.0kb downstream 5.0kb downstream 33688 true Chr05K: 25236337-25270024 Panicum virgatum
Pavir.5KG198800 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 25236337-25241336 Panicum virgatum
Pavir.5KG198800 10.0kb upstream 10.0kb upstream 38688 true Chr05K: 25241337-25280024 Panicum virgatum
Pavir.5KG198800 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 25270025-25280024 Panicum virgatum
Pavir.5KG198800 10.0kb downstream 10.0kb downstream 38688 true Chr05K: 25231337-25270024 Panicum virgatum
Pavir.5KG198800 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 25231337-25241336 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122200701 5267 Panicoideae View MSA
124468509 5269 Grass View MSA
122043013 5273 Angiosperm View MSA
121350238 5274 Embryophyte View MSA
123423775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain