Gene : Pavir.5KG200400 P. virgatum v4.1
Defline:  (1 of 2) K11547 - kinetochore protein NDC80 (NDC80, HEC1, TID3) Genomic Order:  1847
Name:  ? Pavir.5KG200400 Secondary Identifier:  ? PAC:37635133
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG200400 0.5kb upstream 0.5kb upstream 5970 true Chr05K: 25539165-25545134 Panicum virgatum
Pavir.5KG200400 0.5kb upstream 0.5kb upstream 500 false Chr05K: 25539165-25539664 Panicum virgatum
Pavir.5KG200400 0.5kb downstream 0.5kb downstream 5970 true Chr05K: 25539665-25545634 Panicum virgatum
Pavir.5KG200400 0.5kb downstream 0.5kb downstream 500 false Chr05K: 25545135-25545634 Panicum virgatum
Pavir.5KG200400 1.0kb upstream 1.0kb upstream 6470 true Chr05K: 25538665-25545134 Panicum virgatum
Pavir.5KG200400 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 25538665-25539664 Panicum virgatum
Pavir.5KG200400 1.0kb downstream 1.0kb downstream 6470 true Chr05K: 25539665-25546134 Panicum virgatum
Pavir.5KG200400 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 25545135-25546134 Panicum virgatum
Pavir.5KG200400 2.0kb upstream 2.0kb upstream 7470 true Chr05K: 25537665-25545134 Panicum virgatum
Pavir.5KG200400 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 25537665-25539664 Panicum virgatum
Pavir.5KG200400 2.0kb downstream 2.0kb downstream 7470 true Chr05K: 25539665-25547134 Panicum virgatum
Pavir.5KG200400 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 25545135-25547134 Panicum virgatum
Pavir.5KG200400 5.0kb upstream 5.0kb upstream 10470 true Chr05K: 25534665-25545134 Panicum virgatum
Pavir.5KG200400 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 25534665-25539664 Panicum virgatum
Pavir.5KG200400 5.0kb downstream 5.0kb downstream 10470 true Chr05K: 25539665-25550134 Panicum virgatum
Pavir.5KG200400 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 25545135-25550134 Panicum virgatum
Pavir.5KG200400 10.0kb upstream 10.0kb upstream 15470 true Chr05K: 25529665-25545134 Panicum virgatum
Pavir.5KG200400 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 25529665-25539664 Panicum virgatum
Pavir.5KG200400 10.0kb downstream 10.0kb downstream 15470 true Chr05K: 25539665-25555134 Panicum virgatum
Pavir.5KG200400 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 25545135-25555134 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193738 5267 Panicoideae View MSA
124584363 5269 Grass View MSA
122049067 5273 Angiosperm View MSA
121344778 5274 Embryophyte View MSA
123428580 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain