Gene : Pavir.5KG301100 P. virgatum v4.1
Defline:  (1 of 2) PF00994//PF01507 - Probable molybdopterin binding domain (MoCF_biosynth) // Phosphoadenosine phosphosulfate reductase family (PAPS_reduct) Genomic Order:  2744
Name:  ? Pavir.5KG301100 Secondary Identifier:  ? PAC:37635674
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum RIBOSYN2-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG301100 0.5kb upstream 0.5kb upstream 10516 true Chr05K: 54220903-54231418 Panicum virgatum
Pavir.5KG301100 0.5kb upstream 0.5kb upstream 500 false Chr05K: 54230919-54231418 Panicum virgatum
Pavir.5KG301100 0.5kb downstream 0.5kb downstream 10516 true Chr05K: 54220403-54230918 Panicum virgatum
Pavir.5KG301100 0.5kb downstream 0.5kb downstream 500 false Chr05K: 54220403-54220902 Panicum virgatum
Pavir.5KG301100 1.0kb upstream 1.0kb upstream 11016 true Chr05K: 54220903-54231918 Panicum virgatum
Pavir.5KG301100 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 54230919-54231918 Panicum virgatum
Pavir.5KG301100 1.0kb downstream 1.0kb downstream 11016 true Chr05K: 54219903-54230918 Panicum virgatum
Pavir.5KG301100 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 54219903-54220902 Panicum virgatum
Pavir.5KG301100 2.0kb upstream 2.0kb upstream 12016 true Chr05K: 54220903-54232918 Panicum virgatum
Pavir.5KG301100 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 54230919-54232918 Panicum virgatum
Pavir.5KG301100 2.0kb downstream 2.0kb downstream 12016 true Chr05K: 54218903-54230918 Panicum virgatum
Pavir.5KG301100 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 54218903-54220902 Panicum virgatum
Pavir.5KG301100 5.0kb upstream 5.0kb upstream 15016 true Chr05K: 54220903-54235918 Panicum virgatum
Pavir.5KG301100 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 54230919-54235918 Panicum virgatum
Pavir.5KG301100 5.0kb downstream 5.0kb downstream 15016 true Chr05K: 54215903-54230918 Panicum virgatum
Pavir.5KG301100 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 54215903-54220902 Panicum virgatum
Pavir.5KG301100 10.0kb upstream 10.0kb upstream 20016 true Chr05K: 54220903-54240918 Panicum virgatum
Pavir.5KG301100 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 54230919-54240918 Panicum virgatum
Pavir.5KG301100 10.0kb downstream 10.0kb downstream 20016 true Chr05K: 54210903-54230918 Panicum virgatum
Pavir.5KG301100 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 54210903-54220902 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122095449 5267 Panicoideae Singleton cluster - no MSA
124392571 5269 Grass Singleton cluster - no MSA
122049798 5273 Angiosperm View MSA
121344639 5274 Embryophyte View MSA
123427825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain