Gene : Pavir.5KG301000 P. virgatum v4.1
Defline:  (1 of 4) PTHR12741//PTHR12741:SF11 - LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 // SUBFAMILY NOT NAMED Genomic Order:  2743
Name:  ? Pavir.5KG301000 Secondary Identifier:  ? PAC:37637178
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-6773 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG301000 0.5kb upstream 0.5kb upstream 9754 true Chr05K: 54207618-54217371 Panicum virgatum
Pavir.5KG301000 0.5kb upstream 0.5kb upstream 500 false Chr05K: 54216872-54217371 Panicum virgatum
Pavir.5KG301000 0.5kb downstream 0.5kb downstream 9754 true Chr05K: 54207118-54216871 Panicum virgatum
Pavir.5KG301000 0.5kb downstream 0.5kb downstream 500 false Chr05K: 54207118-54207617 Panicum virgatum
Pavir.5KG301000 1.0kb upstream 1.0kb upstream 10254 true Chr05K: 54207618-54217871 Panicum virgatum
Pavir.5KG301000 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 54216872-54217871 Panicum virgatum
Pavir.5KG301000 1.0kb downstream 1.0kb downstream 10254 true Chr05K: 54206618-54216871 Panicum virgatum
Pavir.5KG301000 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 54206618-54207617 Panicum virgatum
Pavir.5KG301000 2.0kb upstream 2.0kb upstream 11254 true Chr05K: 54207618-54218871 Panicum virgatum
Pavir.5KG301000 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 54216872-54218871 Panicum virgatum
Pavir.5KG301000 2.0kb downstream 2.0kb downstream 11254 true Chr05K: 54205618-54216871 Panicum virgatum
Pavir.5KG301000 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 54205618-54207617 Panicum virgatum
Pavir.5KG301000 5.0kb upstream 5.0kb upstream 14254 true Chr05K: 54207618-54221871 Panicum virgatum
Pavir.5KG301000 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 54216872-54221871 Panicum virgatum
Pavir.5KG301000 5.0kb downstream 5.0kb downstream 14254 true Chr05K: 54202618-54216871 Panicum virgatum
Pavir.5KG301000 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 54202618-54207617 Panicum virgatum
Pavir.5KG301000 10.0kb upstream 10.0kb upstream 19254 true Chr05K: 54207618-54226871 Panicum virgatum
Pavir.5KG301000 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 54216872-54226871 Panicum virgatum
Pavir.5KG301000 10.0kb downstream 10.0kb downstream 19254 true Chr05K: 54197618-54216871 Panicum virgatum
Pavir.5KG301000 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 54197618-54207617 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122200807 5267 Panicoideae View MSA
124589873 5269 Grass View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain