Gene : Pavir.5KG285400 P. virgatum v4.1
Defline:  (1 of 3) K00234 - succinate dehydrogenase (ubiquinone) flavoprotein subunit (SDHA, SDH1) Genomic Order:  2609
Name:  ? Pavir.5KG285400 Secondary Identifier:  ? PAC:37634801
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-3781 Panicum virgatum pathologic  
Pvirgatum PWY-4302 Panicum virgatum pathologic  
Pvirgatum PWY-5464 Panicum virgatum pathologic  
Pvirgatum PWY-561 Panicum virgatum pathologic  
Pvirgatum PWY-5690 Panicum virgatum pathologic  
Pvirgatum PWY-7279 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG285400 0.5kb upstream 0.5kb upstream 6258 true Chr05K: 47946296-47952553 Panicum virgatum
Pavir.5KG285400 0.5kb upstream 0.5kb upstream 500 false Chr05K: 47952054-47952553 Panicum virgatum
Pavir.5KG285400 0.5kb downstream 0.5kb downstream 6258 true Chr05K: 47945796-47952053 Panicum virgatum
Pavir.5KG285400 0.5kb downstream 0.5kb downstream 500 false Chr05K: 47945796-47946295 Panicum virgatum
Pavir.5KG285400 1.0kb upstream 1.0kb upstream 6758 true Chr05K: 47946296-47953053 Panicum virgatum
Pavir.5KG285400 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 47952054-47953053 Panicum virgatum
Pavir.5KG285400 1.0kb downstream 1.0kb downstream 6758 true Chr05K: 47945296-47952053 Panicum virgatum
Pavir.5KG285400 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 47945296-47946295 Panicum virgatum
Pavir.5KG285400 2.0kb upstream 2.0kb upstream 7758 true Chr05K: 47946296-47954053 Panicum virgatum
Pavir.5KG285400 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 47952054-47954053 Panicum virgatum
Pavir.5KG285400 2.0kb downstream 2.0kb downstream 7758 true Chr05K: 47944296-47952053 Panicum virgatum
Pavir.5KG285400 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 47944296-47946295 Panicum virgatum
Pavir.5KG285400 5.0kb upstream 5.0kb upstream 10758 true Chr05K: 47946296-47957053 Panicum virgatum
Pavir.5KG285400 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 47952054-47957053 Panicum virgatum
Pavir.5KG285400 5.0kb downstream 5.0kb downstream 10758 true Chr05K: 47941296-47952053 Panicum virgatum
Pavir.5KG285400 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 47941296-47946295 Panicum virgatum
Pavir.5KG285400 10.0kb upstream 10.0kb upstream 15758 true Chr05K: 47946296-47962053 Panicum virgatum
Pavir.5KG285400 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 47952054-47962053 Panicum virgatum
Pavir.5KG285400 10.0kb downstream 10.0kb downstream 15758 true Chr05K: 47936296-47952053 Panicum virgatum
Pavir.5KG285400 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 47936296-47946295 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190568 5267 Panicoideae View MSA
124571712 5269 Grass View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain