Gene : Pavir.5KG351500 P. virgatum v4.1
Defline:  (1 of 2) PTHR30345 - RIBOSE-5-PHOSPHATE ISOMERASE B Genomic Order:  3192
Name:  ? Pavir.5KG351500 Secondary Identifier:  ? PAC:37633976
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum CALVIN-PWY Panicum virgatum pathologic  
Pvirgatum NONOXIPENT-PWY Panicum virgatum pathologic  
Pvirgatum PENTOSE-P-PWY Panicum virgatum pathologic  
Pvirgatum PHOTOALL-PWY Panicum virgatum pathologic  
Pvirgatum PWY-5723 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG351500 0.5kb upstream 0.5kb upstream 1417 true Chr05K: 65814974-65816390 Panicum virgatum
Pavir.5KG351500 0.5kb upstream 0.5kb upstream 500 false Chr05K: 65815891-65816390 Panicum virgatum
Pavir.5KG351500 0.5kb downstream 0.5kb downstream 1417 true Chr05K: 65814474-65815890 Panicum virgatum
Pavir.5KG351500 0.5kb downstream 0.5kb downstream 500 false Chr05K: 65814474-65814973 Panicum virgatum
Pavir.5KG351500 1.0kb upstream 1.0kb upstream 1917 true Chr05K: 65814974-65816890 Panicum virgatum
Pavir.5KG351500 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 65815891-65816890 Panicum virgatum
Pavir.5KG351500 1.0kb downstream 1.0kb downstream 1917 true Chr05K: 65813974-65815890 Panicum virgatum
Pavir.5KG351500 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 65813974-65814973 Panicum virgatum
Pavir.5KG351500 2.0kb upstream 2.0kb upstream 2917 true Chr05K: 65814974-65817890 Panicum virgatum
Pavir.5KG351500 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 65815891-65817890 Panicum virgatum
Pavir.5KG351500 2.0kb downstream 2.0kb downstream 2917 true Chr05K: 65812974-65815890 Panicum virgatum
Pavir.5KG351500 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 65812974-65814973 Panicum virgatum
Pavir.5KG351500 5.0kb upstream 5.0kb upstream 5917 true Chr05K: 65814974-65820890 Panicum virgatum
Pavir.5KG351500 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 65815891-65820890 Panicum virgatum
Pavir.5KG351500 5.0kb downstream 5.0kb downstream 5917 true Chr05K: 65809974-65815890 Panicum virgatum
Pavir.5KG351500 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 65809974-65814973 Panicum virgatum
Pavir.5KG351500 10.0kb upstream 10.0kb upstream 10917 true Chr05K: 65814974-65825890 Panicum virgatum
Pavir.5KG351500 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 65815891-65825890 Panicum virgatum
Pavir.5KG351500 10.0kb downstream 10.0kb downstream 10917 true Chr05K: 65804974-65815890 Panicum virgatum
Pavir.5KG351500 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 65804974-65814973 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186919 5267 Panicoideae View MSA
124569281 5269 Grass View MSA
122042906 5273 Angiosperm View MSA
121349668 5274 Embryophyte View MSA
123381392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain