Gene : Thecc1EG024750 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1624
Name:  ? Thecc1EG024750 Secondary Identifier:  ? PAC:27422851
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024750 0.5kb upstream 0.5kb upstream 4115 true scaffold_5: 28302401-28306515 Theobroma cacao
Thecc1EG024750 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 28302401-28302900 Theobroma cacao
Thecc1EG024750 0.5kb downstream 0.5kb downstream 4115 true scaffold_5: 28302901-28307015 Theobroma cacao
Thecc1EG024750 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 28306516-28307015 Theobroma cacao
Thecc1EG024750 1.0kb upstream 1.0kb upstream 4615 true scaffold_5: 28301901-28306515 Theobroma cacao
Thecc1EG024750 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 28301901-28302900 Theobroma cacao
Thecc1EG024750 1.0kb downstream 1.0kb downstream 4615 true scaffold_5: 28302901-28307515 Theobroma cacao
Thecc1EG024750 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 28306516-28307515 Theobroma cacao
Thecc1EG024750 2.0kb upstream 2.0kb upstream 5615 true scaffold_5: 28300901-28306515 Theobroma cacao
Thecc1EG024750 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 28300901-28302900 Theobroma cacao
Thecc1EG024750 2.0kb downstream 2.0kb downstream 5615 true scaffold_5: 28302901-28308515 Theobroma cacao
Thecc1EG024750 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 28306516-28308515 Theobroma cacao
Thecc1EG024750 5.0kb upstream 5.0kb upstream 8615 true scaffold_5: 28297901-28306515 Theobroma cacao
Thecc1EG024750 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 28297901-28302900 Theobroma cacao
Thecc1EG024750 5.0kb downstream 5.0kb downstream 8615 true scaffold_5: 28302901-28311515 Theobroma cacao
Thecc1EG024750 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 28306516-28311515 Theobroma cacao
Thecc1EG024750 10.0kb upstream 10.0kb upstream 13615 true scaffold_5: 28292901-28306515 Theobroma cacao
Thecc1EG024750 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 28292901-28302900 Theobroma cacao
Thecc1EG024750 10.0kb downstream 10.0kb downstream 13615 true scaffold_5: 28302901-28316515 Theobroma cacao
Thecc1EG024750 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 28306516-28316515 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831060 5264 Brassicales-Malvales View MSA
124341624 5266 SBM View MSA
124252420 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain