Gene : Pavir.6NG103400 P. virgatum v4.1
Defline:  (1 of 4) K01853 - cycloartenol synthase (E5.4.99.8) Genomic Order:  933
Name:  ? Pavir.6NG103400 Secondary Identifier:  ? PAC:37647215
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-2541 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6NG103400 0.5kb upstream 0.5kb upstream 11231 true Chr06N: 17398156-17409386 Panicum virgatum
Pavir.6NG103400 0.5kb upstream 0.5kb upstream 500 false Chr06N: 17398156-17398655 Panicum virgatum
Pavir.6NG103400 0.5kb downstream 0.5kb downstream 11231 true Chr06N: 17398656-17409886 Panicum virgatum
Pavir.6NG103400 0.5kb downstream 0.5kb downstream 500 false Chr06N: 17409387-17409886 Panicum virgatum
Pavir.6NG103400 1.0kb upstream 1.0kb upstream 11731 true Chr06N: 17397656-17409386 Panicum virgatum
Pavir.6NG103400 1.0kb upstream 1.0kb upstream 1000 false Chr06N: 17397656-17398655 Panicum virgatum
Pavir.6NG103400 1.0kb downstream 1.0kb downstream 11731 true Chr06N: 17398656-17410386 Panicum virgatum
Pavir.6NG103400 1.0kb downstream 1.0kb downstream 1000 false Chr06N: 17409387-17410386 Panicum virgatum
Pavir.6NG103400 2.0kb upstream 2.0kb upstream 12731 true Chr06N: 17396656-17409386 Panicum virgatum
Pavir.6NG103400 2.0kb upstream 2.0kb upstream 2000 false Chr06N: 17396656-17398655 Panicum virgatum
Pavir.6NG103400 2.0kb downstream 2.0kb downstream 12731 true Chr06N: 17398656-17411386 Panicum virgatum
Pavir.6NG103400 2.0kb downstream 2.0kb downstream 2000 false Chr06N: 17409387-17411386 Panicum virgatum
Pavir.6NG103400 5.0kb upstream 5.0kb upstream 15731 true Chr06N: 17393656-17409386 Panicum virgatum
Pavir.6NG103400 5.0kb upstream 5.0kb upstream 5000 false Chr06N: 17393656-17398655 Panicum virgatum
Pavir.6NG103400 5.0kb downstream 5.0kb downstream 15731 true Chr06N: 17398656-17414386 Panicum virgatum
Pavir.6NG103400 5.0kb downstream 5.0kb downstream 5000 false Chr06N: 17409387-17414386 Panicum virgatum
Pavir.6NG103400 10.0kb upstream 10.0kb upstream 20731 true Chr06N: 17388656-17409386 Panicum virgatum
Pavir.6NG103400 10.0kb upstream 10.0kb upstream 10000 false Chr06N: 17388656-17398655 Panicum virgatum
Pavir.6NG103400 10.0kb downstream 10.0kb downstream 20731 true Chr06N: 17398656-17419386 Panicum virgatum
Pavir.6NG103400 10.0kb downstream 10.0kb downstream 10000 false Chr06N: 17409387-17419386 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028235 5273 Angiosperm View MSA
122181444 5267 Panicoideae View MSA
124581907 5269 Grass View MSA
121297756 5274 Embryophyte View MSA
123335781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain