Gene : Thecc1EG025125 T. cacao v1.1
Defline:  (1 of 2) PTHR10093 - IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG Genomic Order:  1898
Name:  ? Thecc1EG025125 Secondary Identifier:  ? PAC:27421527
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025125 0.5kb upstream 0.5kb upstream 3003 true scaffold_5: 30805954-30808956 Theobroma cacao
Thecc1EG025125 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 30808457-30808956 Theobroma cacao
Thecc1EG025125 0.5kb downstream 0.5kb downstream 3003 true scaffold_5: 30805454-30808456 Theobroma cacao
Thecc1EG025125 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 30805454-30805953 Theobroma cacao
Thecc1EG025125 1.0kb upstream 1.0kb upstream 3503 true scaffold_5: 30805954-30809456 Theobroma cacao
Thecc1EG025125 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 30808457-30809456 Theobroma cacao
Thecc1EG025125 1.0kb downstream 1.0kb downstream 3503 true scaffold_5: 30804954-30808456 Theobroma cacao
Thecc1EG025125 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 30804954-30805953 Theobroma cacao
Thecc1EG025125 2.0kb upstream 2.0kb upstream 4503 true scaffold_5: 30805954-30810456 Theobroma cacao
Thecc1EG025125 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 30808457-30810456 Theobroma cacao
Thecc1EG025125 2.0kb downstream 2.0kb downstream 4503 true scaffold_5: 30803954-30808456 Theobroma cacao
Thecc1EG025125 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 30803954-30805953 Theobroma cacao
Thecc1EG025125 5.0kb upstream 5.0kb upstream 7503 true scaffold_5: 30805954-30813456 Theobroma cacao
Thecc1EG025125 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 30808457-30813456 Theobroma cacao
Thecc1EG025125 5.0kb downstream 5.0kb downstream 7503 true scaffold_5: 30800954-30808456 Theobroma cacao
Thecc1EG025125 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 30800954-30805953 Theobroma cacao
Thecc1EG025125 10.0kb upstream 10.0kb upstream 12503 true scaffold_5: 30805954-30818456 Theobroma cacao
Thecc1EG025125 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 30808457-30818456 Theobroma cacao
Thecc1EG025125 10.0kb downstream 10.0kb downstream 12503 true scaffold_5: 30795954-30808456 Theobroma cacao
Thecc1EG025125 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 30795954-30805953 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121522515 5273 Angiosperm Singleton cluster - no MSA
123820523 5264 Brassicales-Malvales Singleton cluster - no MSA
124316734 5266 SBM Singleton cluster - no MSA
124165534 5268 Malvidae Singleton cluster - no MSA
123889209 5270 Rosid Singleton cluster - no MSA
123471593 5271 Pentapetalae Singleton cluster - no MSA
122506883 5272 Eudicot Singleton cluster - no MSA
120795313 5274 Embryophyte Singleton cluster - no MSA
122836906 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain