Gene : Thecc1EG025134 T. cacao v1.1
Defline:  (1 of 2) PTHR19241//PTHR19241:SF169 - ATP-BINDING CASSETTE TRANSPORTER // ABC TRANSPORTER G FAMILY MEMBER 31 Genomic Order:  1904
Name:  ? Thecc1EG025134 Secondary Identifier:  ? PAC:27421935
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025134 0.5kb upstream 0.5kb upstream 4298 true scaffold_5: 30863215-30867512 Theobroma cacao
Thecc1EG025134 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 30867013-30867512 Theobroma cacao
Thecc1EG025134 0.5kb downstream 0.5kb downstream 4298 true scaffold_5: 30862715-30867012 Theobroma cacao
Thecc1EG025134 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 30862715-30863214 Theobroma cacao
Thecc1EG025134 1.0kb upstream 1.0kb upstream 4798 true scaffold_5: 30863215-30868012 Theobroma cacao
Thecc1EG025134 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 30867013-30868012 Theobroma cacao
Thecc1EG025134 1.0kb downstream 1.0kb downstream 4798 true scaffold_5: 30862215-30867012 Theobroma cacao
Thecc1EG025134 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 30862215-30863214 Theobroma cacao
Thecc1EG025134 2.0kb upstream 2.0kb upstream 5798 true scaffold_5: 30863215-30869012 Theobroma cacao
Thecc1EG025134 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 30867013-30869012 Theobroma cacao
Thecc1EG025134 2.0kb downstream 2.0kb downstream 5798 true scaffold_5: 30861215-30867012 Theobroma cacao
Thecc1EG025134 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 30861215-30863214 Theobroma cacao
Thecc1EG025134 5.0kb upstream 5.0kb upstream 8798 true scaffold_5: 30863215-30872012 Theobroma cacao
Thecc1EG025134 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 30867013-30872012 Theobroma cacao
Thecc1EG025134 5.0kb downstream 5.0kb downstream 8798 true scaffold_5: 30858215-30867012 Theobroma cacao
Thecc1EG025134 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 30858215-30863214 Theobroma cacao
Thecc1EG025134 10.0kb upstream 10.0kb upstream 13798 true scaffold_5: 30863215-30877012 Theobroma cacao
Thecc1EG025134 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 30867013-30877012 Theobroma cacao
Thecc1EG025134 10.0kb downstream 10.0kb downstream 13798 true scaffold_5: 30853215-30867012 Theobroma cacao
Thecc1EG025134 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 30853215-30863214 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820461 5264 Brassicales-Malvales Singleton cluster - no MSA
124316676 5266 SBM Singleton cluster - no MSA
124165479 5268 Malvidae Singleton cluster - no MSA
124074871 5270 Rosid View MSA
123753751 5271 Pentapetalae View MSA
122795312 5272 Eudicot View MSA
122051259 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain