Gene : Pavir.6NG109700 P. virgatum v4.1
Defline:  (1 of 123) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  989
Name:  ? Pavir.6NG109700 Secondary Identifier:  ? PAC:37647368
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6NG109700 0.5kb upstream 0.5kb upstream 3030 true Chr06N: 19080033-19083062 Panicum virgatum
Pavir.6NG109700 0.5kb upstream 0.5kb upstream 500 false Chr06N: 19082563-19083062 Panicum virgatum
Pavir.6NG109700 0.5kb downstream 0.5kb downstream 3030 true Chr06N: 19079533-19082562 Panicum virgatum
Pavir.6NG109700 0.5kb downstream 0.5kb downstream 500 false Chr06N: 19079533-19080032 Panicum virgatum
Pavir.6NG109700 1.0kb upstream 1.0kb upstream 3530 true Chr06N: 19080033-19083562 Panicum virgatum
Pavir.6NG109700 1.0kb upstream 1.0kb upstream 1000 false Chr06N: 19082563-19083562 Panicum virgatum
Pavir.6NG109700 1.0kb downstream 1.0kb downstream 3530 true Chr06N: 19079033-19082562 Panicum virgatum
Pavir.6NG109700 1.0kb downstream 1.0kb downstream 1000 false Chr06N: 19079033-19080032 Panicum virgatum
Pavir.6NG109700 2.0kb upstream 2.0kb upstream 4530 true Chr06N: 19080033-19084562 Panicum virgatum
Pavir.6NG109700 2.0kb upstream 2.0kb upstream 2000 false Chr06N: 19082563-19084562 Panicum virgatum
Pavir.6NG109700 2.0kb downstream 2.0kb downstream 4530 true Chr06N: 19078033-19082562 Panicum virgatum
Pavir.6NG109700 2.0kb downstream 2.0kb downstream 2000 false Chr06N: 19078033-19080032 Panicum virgatum
Pavir.6NG109700 5.0kb upstream 5.0kb upstream 7530 true Chr06N: 19080033-19087562 Panicum virgatum
Pavir.6NG109700 5.0kb upstream 5.0kb upstream 5000 false Chr06N: 19082563-19087562 Panicum virgatum
Pavir.6NG109700 5.0kb downstream 5.0kb downstream 7530 true Chr06N: 19075033-19082562 Panicum virgatum
Pavir.6NG109700 5.0kb downstream 5.0kb downstream 5000 false Chr06N: 19075033-19080032 Panicum virgatum
Pavir.6NG109700 10.0kb upstream 10.0kb upstream 12530 true Chr06N: 19080033-19092562 Panicum virgatum
Pavir.6NG109700 10.0kb upstream 10.0kb upstream 10000 false Chr06N: 19082563-19092562 Panicum virgatum
Pavir.6NG109700 10.0kb downstream 10.0kb downstream 12530 true Chr06N: 19070033-19082562 Panicum virgatum
Pavir.6NG109700 10.0kb downstream 10.0kb downstream 10000 false Chr06N: 19070033-19080032 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026168 5273 Angiosperm View MSA
122191596 5267 Panicoideae View MSA
124576020 5269 Grass View MSA
121296211 5274 Embryophyte View MSA
123334413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain