Gene : Thecc1EG025116 T. cacao v1.1
Defline:  (1 of 37) PF03101 - FAR1 DNA-binding domain (FAR1) Genomic Order:  1890
Name:  ? Thecc1EG025116 Secondary Identifier:  ? PAC:27421463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025116 0.5kb upstream 0.5kb upstream 4406 true scaffold_5: 30769166-30773571 Theobroma cacao
Thecc1EG025116 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 30769166-30769665 Theobroma cacao
Thecc1EG025116 0.5kb downstream 0.5kb downstream 4406 true scaffold_5: 30769666-30774071 Theobroma cacao
Thecc1EG025116 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 30773572-30774071 Theobroma cacao
Thecc1EG025116 1.0kb upstream 1.0kb upstream 4906 true scaffold_5: 30768666-30773571 Theobroma cacao
Thecc1EG025116 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 30768666-30769665 Theobroma cacao
Thecc1EG025116 1.0kb downstream 1.0kb downstream 4906 true scaffold_5: 30769666-30774571 Theobroma cacao
Thecc1EG025116 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 30773572-30774571 Theobroma cacao
Thecc1EG025116 2.0kb upstream 2.0kb upstream 5906 true scaffold_5: 30767666-30773571 Theobroma cacao
Thecc1EG025116 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 30767666-30769665 Theobroma cacao
Thecc1EG025116 2.0kb downstream 2.0kb downstream 5906 true scaffold_5: 30769666-30775571 Theobroma cacao
Thecc1EG025116 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 30773572-30775571 Theobroma cacao
Thecc1EG025116 5.0kb upstream 5.0kb upstream 8906 true scaffold_5: 30764666-30773571 Theobroma cacao
Thecc1EG025116 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 30764666-30769665 Theobroma cacao
Thecc1EG025116 5.0kb downstream 5.0kb downstream 8906 true scaffold_5: 30769666-30778571 Theobroma cacao
Thecc1EG025116 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 30773572-30778571 Theobroma cacao
Thecc1EG025116 10.0kb upstream 10.0kb upstream 13906 true scaffold_5: 30759666-30773571 Theobroma cacao
Thecc1EG025116 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 30759666-30769665 Theobroma cacao
Thecc1EG025116 10.0kb downstream 10.0kb downstream 13906 true scaffold_5: 30769666-30783571 Theobroma cacao
Thecc1EG025116 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 30773572-30783571 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840685 5264 Brassicales-Malvales View MSA
124348481 5266 SBM View MSA
124241770 5268 Malvidae View MSA
124072842 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain