Gene : Thecc1EG025105 T. cacao v1.1
Defline:  (1 of 1) PTHR11075:SF46 - PROTEIN HIGH CHLOROPHYLL FLUORESCENT 109 Genomic Order:  1881
Name:  ? Thecc1EG025105 Secondary Identifier:  ? PAC:27423274
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025105 0.5kb upstream 0.5kb upstream 10099 true scaffold_5: 30679568-30689666 Theobroma cacao
Thecc1EG025105 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 30689167-30689666 Theobroma cacao
Thecc1EG025105 0.5kb downstream 0.5kb downstream 10099 true scaffold_5: 30679068-30689166 Theobroma cacao
Thecc1EG025105 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 30679068-30679567 Theobroma cacao
Thecc1EG025105 1.0kb upstream 1.0kb upstream 10599 true scaffold_5: 30679568-30690166 Theobroma cacao
Thecc1EG025105 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 30689167-30690166 Theobroma cacao
Thecc1EG025105 1.0kb downstream 1.0kb downstream 10599 true scaffold_5: 30678568-30689166 Theobroma cacao
Thecc1EG025105 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 30678568-30679567 Theobroma cacao
Thecc1EG025105 2.0kb upstream 2.0kb upstream 11599 true scaffold_5: 30679568-30691166 Theobroma cacao
Thecc1EG025105 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 30689167-30691166 Theobroma cacao
Thecc1EG025105 2.0kb downstream 2.0kb downstream 11599 true scaffold_5: 30677568-30689166 Theobroma cacao
Thecc1EG025105 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 30677568-30679567 Theobroma cacao
Thecc1EG025105 5.0kb upstream 5.0kb upstream 14599 true scaffold_5: 30679568-30694166 Theobroma cacao
Thecc1EG025105 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 30689167-30694166 Theobroma cacao
Thecc1EG025105 5.0kb downstream 5.0kb downstream 14599 true scaffold_5: 30674568-30689166 Theobroma cacao
Thecc1EG025105 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 30674568-30679567 Theobroma cacao
Thecc1EG025105 10.0kb upstream 10.0kb upstream 19599 true scaffold_5: 30679568-30699166 Theobroma cacao
Thecc1EG025105 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 30689167-30699166 Theobroma cacao
Thecc1EG025105 10.0kb downstream 10.0kb downstream 19599 true scaffold_5: 30669568-30689166 Theobroma cacao
Thecc1EG025105 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 30669568-30679567 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830529 5264 Brassicales-Malvales View MSA
124339538 5266 SBM View MSA
124243362 5268 Malvidae View MSA
124066936 5270 Rosid View MSA
123749031 5271 Pentapetalae View MSA
122791384 5272 Eudicot View MSA
122043845 5273 Angiosperm View MSA
121345012 5274 Embryophyte View MSA
123428713 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain